RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	FGA	P02671	866 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	VPS53	Q5VIR6	699 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	ANGEL2	Q5VTE6	544 aa	Known RBP	11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	TTC6	Q86TZ1	520 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	SDR42E1	Q8WUS8	393 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	HOOK2	Q96ED9	719 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	USP26	Q9BXU7	913 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	UPF2	Q9HAU5	1272 aa	Known RBP	11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	VEZT	Q9HBM0	779 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	FAM198A	Q9UFP1	575 aa		11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	COL2A1	P02458	1487 aa	Predicted RBP	11.51	□□□□□ -0.57
TRIM5-208	ENST00000465634	TCP10L2	B9ZVM9	353 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	FOXP2	O15409	715 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	TDO2	P48775	406 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	PTH1R	Q03431	593 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	NFIA	Q12857	509 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	NECTIN1	Q15223	517 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	IMMT	Q16891	758 aa	Known RBP	11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	RNF20	Q5VTR2	975 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	LDHD	Q86WU2	507 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	MAPKAPK5	Q8IW41	473 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	SULF1	Q8IWU6	871 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	DDX4	Q9NQI0	724 aa	Known RBP	11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	MCM9	Q9NXL9	1143 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	GGA3	Q9NZ52	723 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	ATRNL1	Q5VV63	1379 aa		11.5	□□□□□ -0.57
TRIM5-208	ENST00000465634	USP17L12	C9JPN9	530 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	USP17L21	D6R901	530 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	ZNF213	O14771	459 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	POLR3D	P05423	398 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	HLA-DOA	P06340	250 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	SLC3A2	P08195	630 aa	Known RBP	11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	PC	P11498	1178 aa	Known RBP	11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	MCC	P23508	829 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	NT5C2	P49902	561 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	PICALM	Q13492	652 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	RASA3	Q14644	834 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	EAPP	Q56P03	285 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	C12orf60	Q5U649	245 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	CTR9	Q6PD62	1173 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	CDC37L1	Q7L3B6	337 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	DEFB129	Q9H1M3	183 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	NMRK2	Q9NPI5	230 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	PI4KB	Q9UBF8	816 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	ANAPC4	Q9UJX5	808 aa		11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	RBM8A	Q9Y5S9	174 aa	Known RBP	11.49	□□□□□ -0.57
TRIM5-208	ENST00000465634	SEC24B	O95487	1268 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	ZKSCAN1	P17029	563 aa	Predicted RBP	11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	CACNB3	P54284	484 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	TCP10	Q12799	353 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	TSGA10IP	Q3SY00	556 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	EHD4	Q9H223	541 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	ZNF287	Q9HBT7	754 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	PALD1	Q9ULE6	856 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	CLEC11A	Q9Y240	323 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	CNTNAP1	P78357	1384 aa		11.48	□□□□□ -0.57
TRIM5-208	ENST00000465634	ASTN2	O75129	1339 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	TBC1D12	O60347	775 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	YY1	P25490	414 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	HSPA4	P34932	840 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	ANAPC15	P60006	121 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	MAP3K10	Q02779	954 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	PPARA	Q07869	468 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	SUPT20HL1	Q3ZLR7	823 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	KRT26	Q7Z3Y9	468 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	METTL16	Q86W50	562 aa	Known RBP	11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	ZFPM1	Q8IX07	1006 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	ZNF526	Q8TF50	670 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	KCNB2	Q92953	911 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	CSRNP1	Q96S65	589 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	RNF41	Q9H4P4	317 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	SWAP70	Q9UH65	585 aa		11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	HERC5	Q9UII4	1024 aa	Known RBP	11.47	□□□□□ -0.57
TRIM5-208	ENST00000465634	DDTL	A6NHG4	134 aa	Predicted RBP	11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	MINDY4B	A8MYZ0	360 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	SLC27A2	O14975	620 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	FGR	P09769	529 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	PLCD1	P51178	756 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	PDE4B	Q07343	736 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	KRT32	Q14532	448 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	CREB3L3	Q68CJ9	461 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	IL27	Q8NEV9	243 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	TEPSIN	Q96N21	525 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	TMEM39B	Q9GZU3	492 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	SAP30BP	Q9UHR5	308 aa	Known RBP	11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	SERPINB13	Q9UIV8	391 aa		11.46	□□□□□ -0.57
TRIM5-208	ENST00000465634	ADAMTSL1	Q8N6G6	1762 aa		11.46	□□□□□ -0.58
TRIM5-208	ENST00000465634	ROBO3	Q96MS0	1386 aa		11.45	□□□□□ -0.58
TRIM5-208	ENST00000465634	CYP21A2	P08686	494 aa		11.45	□□□□□ -0.58
TRIM5-208	ENST00000465634	NF2	P35240	595 aa		11.45	□□□□□ -0.58
TRIM5-208	ENST00000465634	RBM25	P49756	843 aa	Known RBP	11.45	□□□□□ -0.58
TRIM5-208	ENST00000465634	GABPA	Q06546	454 aa		11.45	□□□□□ -0.58
TRIM5-208	ENST00000465634	AKNAD1	Q5T1N1	836 aa		11.45	□□□□□ -0.58
TRIM5-208	ENST00000465634	DCAF15	Q66K64	600 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms