RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 FAM122AQ96E09 287 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 HOOK2Q96ED9 719 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 ZNF341Q9BYN7 854 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 PFASO15067 1338 aa12.33□□□□□ -0.44
USP39-212ENST00000465514 RPAP1Q9BWH6 1393 aaPredicted RBP12.32□□□□□ -0.44
USP39-212ENST00000465514 F6X3S4 739 aa12.32□□□□□ -0.44
USP39-212ENST00000465514 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
USP39-212ENST00000465514 FOXO4P98177 505 aa12.32□□□□□ -0.44
USP39-212ENST00000465514 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 ANP32CO43423 234 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 IFIT5Q13325 482 aaKnown RBP12.31□□□□□ -0.44
USP39-212ENST00000465514 GRIK5Q16478 980 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 POTEHQ6S545 545 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 FAM83AQ86UY5 434 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 MYLIPQ8WY64 445 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 TMOD2Q9NZR1 351 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
USP39-212ENST00000465514 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
USP39-212ENST00000465514 HMGCRP04035 888 aa12.3□□□□□ -0.44
USP39-212ENST00000465514 TRIM32Q13049 653 aa12.3□□□□□ -0.44
USP39-212ENST00000465514 TDRD7Q8NHU6 1098 aaKnown RBP12.3□□□□□ -0.44
USP39-212ENST00000465514 COA7Q96BR5 231 aa12.3□□□□□ -0.44
USP39-212ENST00000465514 PLIN1O60240 522 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 GYG1P46976 350 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 LRRC26Q2I0M4 334 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 EPHA10Q5JZY3 1008 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 SMCR8Q8TEV9 937 aaPredicted RBP12.29□□□□□ -0.44
USP39-212ENST00000465514 TEKT1Q969V4 418 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
USP39-212ENST00000465514 SEMA6BQ9H3T3 888 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 HMX1Q9NP08 348 aaPredicted RBP12.29□□□□□ -0.44
USP39-212ENST00000465514 OGDHLQ9ULD0 1010 aa12.29□□□□□ -0.44
USP39-212ENST00000465514 GRM8O00222 908 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 CXCL11O14625 94 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 FOSL2P15408 326 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 CCDC57Q2TAC2 916 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 NOL9Q5SY16 702 aaKnown RBP12.28□□□□□ -0.44
USP39-212ENST00000465514 FKBP1CQ5VVH2 108 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 GADL1Q6ZQY3 521 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 ZNF112Q9UJU3 913 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 LOC285556D6RIA3 1793 aa12.28□□□□□ -0.44
USP39-212ENST00000465514 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
USP39-212ENST00000465514 COL6A1P12109 1028 aa12.27□□□□□ -0.45
USP39-212ENST00000465514 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.45
USP39-212ENST00000465514 HDLBPQ00341 1268 aaKnown RBP12.27□□□□□ -0.45
USP39-212ENST00000465514 TAF7LQ5H9L4 462 aa12.27□□□□□ -0.45
USP39-212ENST00000465514 LDHAL6AQ6ZMR3 332 aa12.27□□□□□ -0.45
USP39-212ENST00000465514 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.45
USP39-212ENST00000465514 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
USP39-212ENST00000465514 ANKRD13CQ8N6S4 541 aa12.27□□□□□ -0.45
USP39-212ENST00000465514 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.45
USP39-212ENST00000465514 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
USP39-212ENST00000465514 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
USP39-212ENST00000465514 ZNF316A6NFI3 1004 aaPredicted RBP12.26□□□□□ -0.45
USP39-212ENST00000465514 CHAF1AQ13111 956 aaPredicted RBP12.26□□□□□ -0.45
USP39-212ENST00000465514 APOBEC3HQ6NTF7 200 aaKnown RBP12.26□□□□□ -0.45
USP39-212ENST00000465514 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
USP39-212ENST00000465514 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
USP39-212ENST00000465514 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
USP39-212ENST00000465514 CNNM1Q9NRU3 951 aa12.26□□□□□ -0.45
USP39-212ENST00000465514 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
USP39-212ENST00000465514 SLC45A1Q9Y2W3 748 aa12.26□□□□□ -0.45
USP39-212ENST00000465514 ALDH1L1O75891 902 aa12.25□□□□□ -0.45
USP39-212ENST00000465514 MAP3K12Q12852 859 aa12.25□□□□□ -0.45
USP39-212ENST00000465514 TRIB2Q92519 343 aa12.25□□□□□ -0.45
USP39-212ENST00000465514 FAM84BQ96KN1 310 aaPredicted RBP12.25□□□□□ -0.45
USP39-212ENST00000465514 ZHX2Q9Y6X8 837 aa12.25□□□□□ -0.45
USP39-212ENST00000465514 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
USP39-212ENST00000465514 TCP10Q12799 353 aa12.24□□□□□ -0.45
USP39-212ENST00000465514 FAM110CQ1W6H9 321 aa12.24□□□□□ -0.45
USP39-212ENST00000465514 USP38Q8NB14 1042 aa12.24□□□□□ -0.45
USP39-212ENST00000465514 FAM151AQ8WW52 585 aa12.24□□□□□ -0.45
USP39-212ENST00000465514 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
USP39-212ENST00000465514 SRCIN1Q9C0H9 1055 aa12.24□□□□□ -0.45
USP39-212ENST00000465514 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
USP39-212ENST00000465514 ZEB1P37275 1124 aaPredicted RBP12.23□□□□□ -0.45
USP39-212ENST00000465514 MAP3K21Q5TCX8 1036 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 TBC1D22AQ8WUA7 517 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 KAZALD1Q96I82 304 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 PUS3Q9BZE2 481 aaKnown RBP12.23□□□□□ -0.45
USP39-212ENST00000465514 PICK1Q9NRD5 415 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 GJD2Q9UKL4 321 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 AFG3L2Q9Y4W6 797 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 RLFQ13129 1914 aa12.23□□□□□ -0.45
USP39-212ENST00000465514 MAST3O60307 1309 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 ZBTB22O15209 634 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
USP39-212ENST00000465514 PTPRAP18433 802 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 UBE4AQ14139 1066 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 SHHQ15465 462 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 AGTPBP1Q9UPW5 1226 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 MYO9BQ13459 2157 aa12.22□□□□□ -0.45
USP39-212ENST00000465514 ATRNL1Q5VV63 1379 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms