RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 DIXDC1Q155Q3 683 aa18.96■□□□□ 0.63
HDAC6-214ENST00000465269 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
HDAC6-214ENST00000465269 CDC42EP5Q6NZY7 148 aa18.96■□□□□ 0.63
HDAC6-214ENST00000465269 TBC1D22AQ8WUA7 517 aa18.96■□□□□ 0.63
HDAC6-214ENST00000465269 FAM198AQ9UFP1 575 aa18.96■□□□□ 0.63
HDAC6-214ENST00000465269 PHF20L1A8MW92 1017 aa18.95■□□□□ 0.62
HDAC6-214ENST00000465269 LRRC24Q50LG9 513 aa18.95■□□□□ 0.62
HDAC6-214ENST00000465269 ANKLE1Q8NAG6 615 aa18.95■□□□□ 0.62
HDAC6-214ENST00000465269 COA7Q96BR5 231 aa18.95■□□□□ 0.62
HDAC6-214ENST00000465269 SPINK5Q9NQ38 1064 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-214ENST00000465269 TRIM75PA6NK02 468 aa18.94■□□□□ 0.62
HDAC6-214ENST00000465269 PTPRAP18433 802 aa18.94■□□□□ 0.62
HDAC6-214ENST00000465269 TREML2Q5T2D2 321 aa18.94■□□□□ 0.62
HDAC6-214ENST00000465269 HHIPL2Q6UWX4 724 aa18.94■□□□□ 0.62
HDAC6-214ENST00000465269 FASTKD5Q7L8L6 764 aaKnown RBP18.94■□□□□ 0.62
HDAC6-214ENST00000465269 DAGLAQ9Y4D2 1042 aa18.94■□□□□ 0.62
HDAC6-214ENST00000465269 AFG3L2Q9Y4W6 797 aa18.94■□□□□ 0.62
HDAC6-214ENST00000465269 HMGCRP04035 888 aa18.93■□□□□ 0.62
HDAC6-214ENST00000465269 LRRC26Q2I0M4 334 aa18.93■□□□□ 0.62
HDAC6-214ENST00000465269 HMX1Q9NP08 348 aaPredicted RBP18.93■□□□□ 0.62
HDAC6-214ENST00000465269 PTPRFP10586 1907 aa18.93■□□□□ 0.62
HDAC6-214ENST00000465269 ATRNL1Q5VV63 1379 aa18.93■□□□□ 0.62
HDAC6-214ENST00000465269 GRM8O00222 908 aa18.92■□□□□ 0.62
HDAC6-214ENST00000465269 SCYL3Q8IZE3 742 aa18.92■□□□□ 0.62
HDAC6-214ENST00000465269 KAZALD1Q96I82 304 aa18.92■□□□□ 0.62
HDAC6-214ENST00000465269 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
HDAC6-214ENST00000465269 MRIQ9BWK5 157 aa18.92■□□□□ 0.62
HDAC6-214ENST00000465269 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
HDAC6-214ENST00000465269 PEX10O60683 326 aa18.91■□□□□ 0.62
HDAC6-214ENST00000465269 CAPN2P17655 700 aa18.91■□□□□ 0.62
HDAC6-214ENST00000465269 CAVIN4Q5BKX8 364 aa18.91■□□□□ 0.62
HDAC6-214ENST00000465269 METTL24Q5JXM2 366 aa18.91■□□□□ 0.62
HDAC6-214ENST00000465269 TRIB2Q92519 343 aa18.91■□□□□ 0.62
HDAC6-214ENST00000465269 CDX2Q99626 313 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-214ENST00000465269 GJD2Q9UKL4 321 aa18.91■□□□□ 0.62
HDAC6-214ENST00000465269 OGDHLQ9ULD0 1010 aa18.91■□□□□ 0.62
HDAC6-214ENST00000465269 SH3BP5LQ7L8J4 393 aa18.9■□□□□ 0.62
HDAC6-214ENST00000465269 MAFAQ8NHW3 353 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-214ENST00000465269 KLHDC4Q8TBB5 520 aa18.9■□□□□ 0.62
HDAC6-214ENST00000465269 USP40Q9NVE5 1235 aa18.9■□□□□ 0.62
HDAC6-214ENST00000465269 MAST3O60307 1309 aa18.9■□□□□ 0.62
HDAC6-214ENST00000465269 PHIPQ8WWQ0 1821 aa18.89■□□□□ 0.61
HDAC6-214ENST00000465269 COL9A1P20849 921 aa18.89■□□□□ 0.61
HDAC6-214ENST00000465269 FAM109BQ6ICB4 259 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-214ENST00000465269 VGLL2Q8N8G2 317 aa18.89■□□□□ 0.61
HDAC6-214ENST00000465269 C9orf78Q9NZ63 289 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-214ENST00000465269 SLC45A1Q9Y2W3 748 aa18.89■□□□□ 0.61
HDAC6-214ENST00000465269 MROH5Q6ZUA9 1318 aa18.89■□□□□ 0.61
HDAC6-214ENST00000465269 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-214ENST00000465269 PLXNB2O15031 1838 aa18.88■□□□□ 0.61
HDAC6-214ENST00000465269 PRKAR2AP13861 404 aaKnown RBP18.88■□□□□ 0.61
HDAC6-214ENST00000465269 CYP2B6P20813 491 aa18.88■□□□□ 0.61
HDAC6-214ENST00000465269 PRDX5P30044 214 aa18.88■□□□□ 0.61
HDAC6-214ENST00000465269 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
HDAC6-214ENST00000465269 FAM110CQ1W6H9 321 aa18.88■□□□□ 0.61
HDAC6-214ENST00000465269 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
HDAC6-214ENST00000465269 COL6A1P12109 1028 aa18.87■□□□□ 0.61
HDAC6-214ENST00000465269 RGS3P49796 1198 aa18.87■□□□□ 0.61
HDAC6-214ENST00000465269 ZNF697Q5TEC3 545 aa18.87■□□□□ 0.61
HDAC6-214ENST00000465269 MYLIPQ8WY64 445 aa18.87■□□□□ 0.61
HDAC6-214ENST00000465269 DOCK2Q92608 1830 aa18.87■□□□□ 0.61
HDAC6-214ENST00000465269 FAM196BA6NMK8 535 aa18.86■□□□□ 0.61
HDAC6-214ENST00000465269 SUGT1Q9Y2Z0 365 aa18.86■□□□□ 0.61
HDAC6-214ENST00000465269 LRRFIP2Q9Y608 721 aaKnown RBP18.86■□□□□ 0.61
HDAC6-214ENST00000465269 DDTLA6NHG4 134 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-214ENST00000465269 PDE8BO95263 885 aa18.85■□□□□ 0.61
HDAC6-214ENST00000465269 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
HDAC6-214ENST00000465269 ZSCAN29Q8IWY8 852 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-214ENST00000465269 DOCK1Q14185 1865 aa18.84■□□□□ 0.61
HDAC6-214ENST00000465269 BDP1A6H8Y1 2624 aa18.84■□□□□ 0.61
HDAC6-214ENST00000465269 VAMP4O75379 141 aa18.84■□□□□ 0.61
HDAC6-214ENST00000465269 NBPF7P0C2Y1 421 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-214ENST00000465269 CCND3P30281 292 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-214ENST00000465269 MAP3K21Q5TCX8 1036 aa18.84■□□□□ 0.61
HDAC6-214ENST00000465269 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
HDAC6-214ENST00000465269 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
HDAC6-214ENST00000465269 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
HDAC6-214ENST00000465269 ZEB1P37275 1124 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-214ENST00000465269 CACNB2Q08289 660 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-214ENST00000465269 WWC1Q8IX03 1113 aa18.83■□□□□ 0.6
HDAC6-214ENST00000465269 DDX4Q9NQI0 724 aaKnown RBP18.83■□□□□ 0.6
HDAC6-214ENST00000465269 MYH13Q9UKX3 1938 aa18.82■□□□□ 0.6
HDAC6-214ENST00000465269 FGFR2P21802 821 aa18.82■□□□□ 0.6
HDAC6-214ENST00000465269 ATN1P54259 1190 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-214ENST00000465269 HMGCS2P54868 508 aa18.82■□□□□ 0.6
HDAC6-214ENST00000465269 CCL14Q16627 93 aa18.82■□□□□ 0.6
HDAC6-214ENST00000465269 LHX8Q68G74 356 aa18.82■□□□□ 0.6
HDAC6-214ENST00000465269 ANKRD44Q8N8A2 993 aa18.82■□□□□ 0.6
HDAC6-214ENST00000465269 WDR66Q8TBY9 1149 aa18.82■□□□□ 0.6
HDAC6-214ENST00000465269 ASCC2Q9H1I8 757 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-214ENST00000465269 TTYH1Q9H313 450 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-214ENST00000465269 SPP2Q13103 211 aa18.81■□□□□ 0.6
HDAC6-214ENST00000465269 PICALMQ13492 652 aa18.81■□□□□ 0.6
HDAC6-214ENST00000465269 C9orf50Q5SZB4 431 aa18.81■□□□□ 0.6
HDAC6-214ENST00000465269 LBHD1Q9BQE6 289 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-214ENST00000465269 PNMA3Q9UL41 463 aa18.81■□□□□ 0.6
HDAC6-214ENST00000465269 CTNND1O60716 968 aaKnown RBP18.8■□□□□ 0.6
HDAC6-214ENST00000465269 LDHBP07195 334 aaKnown RBP18.8■□□□□ 0.6
HDAC6-214ENST00000465269 EXOSC9Q06265 439 aaKnown RBP18.8■□□□□ 0.6
HDAC6-214ENST00000465269 PUM3Q15397 648 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms