RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 BNIP3Q12983 259 aa7.44□□□□□ -1.22
VPS8-217ENST00000465213 SMYD4Q8IYR2 804 aaPredicted RBP7.44□□□□□ -1.22
VPS8-217ENST00000465213 MAPK1P28482 360 aa7.43□□□□□ -1.22
VPS8-217ENST00000465213 GRM2Q14416 872 aa7.43□□□□□ -1.22
VPS8-217ENST00000465213 DSC3Q14574 896 aa7.43□□□□□ -1.22
VPS8-217ENST00000465213 FAM181AQ8N9Y4 354 aa7.43□□□□□ -1.22
VPS8-217ENST00000465213 MBNL3Q9NUK0 354 aaKnown RBP7.43□□□□□ -1.22
VPS8-217ENST00000465213 U3KQE9 123 aa7.43□□□□□ -1.22
VPS8-217ENST00000465213 PATL2C9JE40 543 aaKnown RBP7.42□□□□□ -1.22
VPS8-217ENST00000465213 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
VPS8-217ENST00000465213 IFI16Q16666 785 aaKnown RBP7.42□□□□□ -1.22
VPS8-217ENST00000465213 PDZD3Q86UT5 571 aa7.42□□□□□ -1.22
VPS8-217ENST00000465213 AEBP1Q8IUX7 1158 aa7.42□□□□□ -1.22
VPS8-217ENST00000465213 CSRNP1Q96S65 589 aa7.42□□□□□ -1.22
VPS8-217ENST00000465213 ADAMTS6Q9UKP5 1117 aa7.42□□□□□ -1.22
VPS8-217ENST00000465213 TREHO43280 583 aa7.41□□□□□ -1.22
VPS8-217ENST00000465213 GADD45BO75293 160 aaPredicted RBP7.41□□□□□ -1.22
VPS8-217ENST00000465213 OXCT1P55809 520 aa7.41□□□□□ -1.22
VPS8-217ENST00000465213 TTLL4Q14679 1199 aa7.41□□□□□ -1.22
VPS8-217ENST00000465213 ZNF648Q5T619 568 aaPredicted RBP7.41□□□□□ -1.22
VPS8-217ENST00000465213 DUSP23Q9BVJ7 150 aa7.41□□□□□ -1.22
VPS8-217ENST00000465213 RC3H2Q9HBD1 1191 aaKnown RBP7.41□□□□□ -1.22
VPS8-217ENST00000465213 PCOLCE2Q9UKZ9 415 aa7.41□□□□□ -1.22
VPS8-217ENST00000465213 CEACAM5P06731 702 aa7.4□□□□□ -1.22
VPS8-217ENST00000465213 ZNF157P51786 506 aaPredicted RBP7.4□□□□□ -1.22
VPS8-217ENST00000465213 PLCB3Q01970 1234 aa7.4□□□□□ -1.22
VPS8-217ENST00000465213 TMEM40Q8WWA1 233 aa7.4□□□□□ -1.22
VPS8-217ENST00000465213 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
VPS8-217ENST00000465213 TMEM39AQ9NV64 488 aa7.4□□□□□ -1.22
VPS8-217ENST00000465213 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 LEFTY1O75610 366 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 NEFMP07197 916 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
VPS8-217ENST00000465213 PPP2R3AQ06190 1150 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 EPS8L3Q8TE67 593 aaKnown RBP7.39□□□□□ -1.23
VPS8-217ENST00000465213 FAM168AQ92567 244 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 HRASLS5Q96KN8 279 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 TNKS2Q9H2K2 1166 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 PLAGL2Q9UPG8 496 aa7.39□□□□□ -1.23
VPS8-217ENST00000465213 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
VPS8-217ENST00000465213 HCLS1P14317 486 aaPredicted RBP7.38□□□□□ -1.23
VPS8-217ENST00000465213 DTHD1Q6ZMT9 781 aa7.38□□□□□ -1.23
VPS8-217ENST00000465213 LRRN4CLQ8ND94 238 aa7.38□□□□□ -1.23
VPS8-217ENST00000465213 PI4K2BQ8TCG2 481 aa7.38□□□□□ -1.23
VPS8-217ENST00000465213 ASB16Q96NS5 453 aa7.38□□□□□ -1.23
VPS8-217ENST00000465213 DBX1A6NMT0 343 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 CD96P40200 585 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 ERVK-24P63145 666 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 ENOX2Q16206 610 aaKnown RBP7.37□□□□□ -1.23
VPS8-217ENST00000465213 AOC3Q16853 763 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 ZC3H12AQ5D1E8 599 aaKnown RBP7.37□□□□□ -1.23
VPS8-217ENST00000465213 ZSCAN29Q8IWY8 852 aaPredicted RBP7.37□□□□□ -1.23
VPS8-217ENST00000465213 RNF214Q8ND24 703 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 FLAD1Q8NFF5 587 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 ISL2Q96A47 359 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 KRTAP4-9Q9BYQ8 210 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 CACNA2D2Q9NY47 1150 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 SNX11Q9Y5W9 270 aa7.37□□□□□ -1.23
VPS8-217ENST00000465213 PNMA6FA0A0J9YX94 578 aa7.36□□□□□ -1.23
VPS8-217ENST00000465213 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
VPS8-217ENST00000465213 FMR1Q06787 632 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS8-217ENST00000465213 ANGEL2Q5VTE6 544 aaKnown RBP7.36□□□□□ -1.23
VPS8-217ENST00000465213 SLC23A3Q6PIS1 610 aa7.36□□□□□ -1.23
VPS8-217ENST00000465213 PI16Q6UXB8 463 aa7.36□□□□□ -1.23
VPS8-217ENST00000465213 FAM214BQ7L5A3 538 aa7.36□□□□□ -1.23
VPS8-217ENST00000465213 GPN3Q9UHW5 284 aaPredicted RBP7.36□□□□□ -1.23
VPS8-217ENST00000465213 ARNTP27540 789 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 FCGRTP55899 365 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 ZNF252P-AS1Q0IIN9 211 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 ZNF124Q15973 351 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 SND1Q7KZF4 910 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS8-217ENST00000465213 SULF2Q8IWU5 870 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 TOP6BLQ8N6T0 577 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 STK35Q8TDR2 534 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 KCNB2Q92953 911 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
VPS8-217ENST00000465213 PPP4R2Q9NY27 417 aa7.35□□□□□ -1.23
VPS8-217ENST00000465213 IGF2BP3O00425 579 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS8-217ENST00000465213 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
VPS8-217ENST00000465213 ARHGAP27Q6ZUM4 889 aa7.34□□□□□ -1.23
VPS8-217ENST00000465213 BHLHE22Q8NFJ8 381 aaPredicted RBP7.34□□□□□ -1.23
VPS8-217ENST00000465213 NME2P22392 152 aa7.33□□□□□ -1.24
VPS8-217ENST00000465213 MAPK8P45983 427 aa7.33□□□□□ -1.24
VPS8-217ENST00000465213 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS8-217ENST00000465213 SPOCD1Q6ZMY3 1216 aa7.33□□□□□ -1.24
VPS8-217ENST00000465213 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS8-217ENST00000465213 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
VPS8-217ENST00000465213 EMILIN2Q9BXX0 1053 aa7.33□□□□□ -1.24
VPS8-217ENST00000465213 BCO2Q9BYV7 579 aa7.33□□□□□ -1.24
VPS8-217ENST00000465213 NLRP2Q9NX02 1062 aa7.33□□□□□ -1.24
VPS8-217ENST00000465213 NTF4P34130 210 aa7.32□□□□□ -1.24
VPS8-217ENST00000465213 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
VPS8-217ENST00000465213 PKN1Q16512 942 aa7.32□□□□□ -1.24
VPS8-217ENST00000465213 GTF2IRD1Q9UHL9 959 aa7.32□□□□□ -1.24
VPS8-217ENST00000465213 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
VPS8-217ENST00000465213 TTBK1Q5TCY1 1321 aaPredicted RBP7.31□□□□□ -1.24
VPS8-217ENST00000465213 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
VPS8-217ENST00000465213 FBLN7Q53RD9 439 aa7.31□□□□□ -1.24
VPS8-217ENST00000465213 MAP1SQ66K74 1059 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms