RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 CACNA1AO00555 2505 aa15.9■□□□□ 0.14
SNX17-205ENST00000464279 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
SNX17-205ENST00000464279 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
SNX17-205ENST00000464279 NEXNQ0ZGT2 675 aa15.89■□□□□ 0.13
SNX17-205ENST00000464279 GRIK5Q16478 980 aa15.89■□□□□ 0.13
SNX17-205ENST00000464279 PPM1EQ8WY54 764 aa15.89■□□□□ 0.13
SNX17-205ENST00000464279 SENP6Q9GZR1 1112 aaPredicted RBP15.89■□□□□ 0.13
SNX17-205ENST00000464279 PNMA3Q9UL41 463 aa15.89■□□□□ 0.13
SNX17-205ENST00000464279 A0A1B0GUL6 1792 aa15.88■□□□□ 0.13
SNX17-205ENST00000464279 H7C1W4 665 aa15.88■□□□□ 0.13
SNX17-205ENST00000464279 CSF1RP07333 972 aa15.88■□□□□ 0.13
SNX17-205ENST00000464279 CWF19L2Q2TBE0 894 aaKnown RBP15.88■□□□□ 0.13
SNX17-205ENST00000464279 LHX8Q68G74 356 aa15.88■□□□□ 0.13
SNX17-205ENST00000464279 MIER1Q8N108 512 aa15.88■□□□□ 0.13
SNX17-205ENST00000464279 PICK1Q9NRD5 415 aa15.88■□□□□ 0.13
SNX17-205ENST00000464279 AGTPBP1Q9UPW5 1226 aa15.88■□□□□ 0.13
SNX17-205ENST00000464279 ATN1P54259 1190 aaPredicted RBP15.87■□□□□ 0.13
SNX17-205ENST00000464279 APOBEC3HQ6NTF7 200 aaKnown RBP15.87■□□□□ 0.13
SNX17-205ENST00000464279 FAM151AQ8WW52 585 aa15.87■□□□□ 0.13
SNX17-205ENST00000464279 AFG3L2Q9Y4W6 797 aa15.87■□□□□ 0.13
SNX17-205ENST00000464279 NEURL1BA8MQ27 555 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
SNX17-205ENST00000464279 PTPRAP18433 802 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 CYP2B6P20813 491 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 HIBADHP31937 336 aaKnown RBP15.86■□□□□ 0.13
SNX17-205ENST00000464279 GYG1P46976 350 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 GCLCP48506 637 aaPredicted RBP15.86■□□□□ 0.13
SNX17-205ENST00000464279 RTP1P59025 263 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 CACNB2Q08289 660 aaPredicted RBP15.86■□□□□ 0.13
SNX17-205ENST00000464279 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 TRMT44Q8IYL2 757 aaKnown RBP15.86■□□□□ 0.13
SNX17-205ENST00000464279 SCYL3Q8IZE3 742 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 BADQ92934 168 aa15.86■□□□□ 0.13
SNX17-205ENST00000464279 RNPC3Q96LT9 517 aaKnown RBP15.86■□□□□ 0.13
SNX17-205ENST00000464279 GAS2L1Q99501 681 aaPredicted RBP15.86■□□□□ 0.13
SNX17-205ENST00000464279 PLIN1O60240 522 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 DNAJB2P25686 324 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 TMEM31Q5JXX7 168 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 FAM9BQ8IZU0 186 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 TBC1D22AQ8WUA7 517 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 NECAB3Q96P71 396 aaPredicted RBP15.85■□□□□ 0.13
SNX17-205ENST00000464279 MRIQ9BWK5 157 aa15.85■□□□□ 0.13
SNX17-205ENST00000464279 PRDM5Q9NQX1 630 aaPredicted RBP15.85■□□□□ 0.13
SNX17-205ENST00000464279 PI4KAP2A4QPH2 592 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 APAF1O14727 1248 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 XRCC5P13010 732 aaKnown RBP15.84■□□□□ 0.13
SNX17-205ENST00000464279 CCND3P30281 292 aaPredicted RBP15.84■□□□□ 0.13
SNX17-205ENST00000464279 IFIT5Q13325 482 aaKnown RBP15.84■□□□□ 0.13
SNX17-205ENST00000464279 NEUROD2Q15784 382 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 POTEEQ6S8J3 1075 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 PI4KAP1Q8N8J0 262 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 SOCS4Q8WXH5 440 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 ZNF576Q9H609 170 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 ATP11BQ9Y2G3 1177 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 MAST3O60307 1309 aa15.84■□□□□ 0.13
SNX17-205ENST00000464279 TRIM75PA6NK02 468 aa15.83■□□□□ 0.12
SNX17-205ENST00000464279 TCP10Q12799 353 aa15.83■□□□□ 0.12
SNX17-205ENST00000464279 CHAF1AQ13111 956 aaPredicted RBP15.83■□□□□ 0.12
SNX17-205ENST00000464279 TREML2Q5T2D2 321 aa15.83■□□□□ 0.12
SNX17-205ENST00000464279 FAM84BQ96KN1 310 aaPredicted RBP15.83■□□□□ 0.12
SNX17-205ENST00000464279 NUDT12Q9BQG2 462 aa15.83■□□□□ 0.12
SNX17-205ENST00000464279 P2RX7Q99572 595 aaKnown RBP15.82■□□□□ 0.12
SNX17-205ENST00000464279 MBIPQ9NS73 344 aa15.82■□□□□ 0.12
SNX17-205ENST00000464279 PHF20L1A8MW92 1017 aa15.81■□□□□ 0.12
SNX17-205ENST00000464279 CASP7P55210 303 aa15.81■□□□□ 0.12
SNX17-205ENST00000464279 UBE4AQ14139 1066 aa15.81■□□□□ 0.12
SNX17-205ENST00000464279 HHIPL2Q6UWX4 724 aa15.81■□□□□ 0.12
SNX17-205ENST00000464279 EPHX3Q9H6B9 360 aa15.81■□□□□ 0.12
SNX17-205ENST00000464279 TRIM35Q9UPQ4 493 aa15.81■□□□□ 0.12
SNX17-205ENST00000464279 CHMP3Q9Y3E7 222 aa15.81■□□□□ 0.12
SNX17-205ENST00000464279 PTPRFP10586 1907 aa15.8■□□□□ 0.12
SNX17-205ENST00000464279 PLXNB2O15031 1838 aa15.8■□□□□ 0.12
SNX17-205ENST00000464279 DNM1LO00429 736 aa15.8■□□□□ 0.12
SNX17-205ENST00000464279 ELL2O00472 640 aaPredicted RBP15.8■□□□□ 0.12
SNX17-205ENST00000464279 MRE11P49959 708 aa15.8■□□□□ 0.12
SNX17-205ENST00000464279 GCKRQ14397 625 aa15.8■□□□□ 0.12
SNX17-205ENST00000464279 VPS37DQ86XT2 251 aa15.8■□□□□ 0.12
SNX17-205ENST00000464279 PROCA1Q8NCQ7 364 aaPredicted RBP15.8■□□□□ 0.12
SNX17-205ENST00000464279 TIFAQ96CG3 184 aa15.8■□□□□ 0.12
SNX17-205ENST00000464279 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
SNX17-205ENST00000464279 IQSEC3Q9UPP2 1182 aaPredicted RBP15.8■□□□□ 0.12
SNX17-205ENST00000464279 ATRNL1Q5VV63 1379 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.79■□□□□ 0.12
SNX17-205ENST00000464279 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.79■□□□□ 0.12
SNX17-205ENST00000464279 FRAT2O75474 233 aaPredicted RBP15.79■□□□□ 0.12
SNX17-205ENST00000464279 NFIAQ12857 509 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNX17-205ENST00000464279 CCDC85BQ15834 202 aaPredicted RBP15.79■□□□□ 0.12
SNX17-205ENST00000464279 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 LDHAL6AQ6ZMR3 332 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 PDLIM7Q9NR12 457 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 MORF4L1Q9UBU8 362 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 SUGT1Q9Y2Z0 365 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 DNAH12Q6ZR08 3092 aa15.79■□□□□ 0.12
SNX17-205ENST00000464279 BMP1P13497 986 aa15.78■□□□□ 0.12
SNX17-205ENST00000464279 TAF7LQ5H9L4 462 aa15.78■□□□□ 0.12
SNX17-205ENST00000464279 CHMP4AQ9BY43 222 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms