RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 FLCNQ8NFG4 579 aa7.88□□□□□ -1.15
ITGB1-208ENST00000464001 ACSBG1Q96GR2 724 aa7.88□□□□□ -1.15
ITGB1-208ENST00000464001 SSU72Q9NP77 194 aaKnown RBP7.88□□□□□ -1.15
ITGB1-208ENST00000464001 FAM87AP0C7U9 286 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 ERVK-24P63145 666 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 ZNF252P-AS1Q0IIN9 211 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 ZC3H12AQ5D1E8 599 aaKnown RBP7.87□□□□□ -1.15
ITGB1-208ENST00000464001 TPTE2Q6XPS3 522 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 AGBL5Q8NDL9 886 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 GPBAR1Q8TDU6 330 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 OSBPL7Q9BZF2 842 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 SPG7Q9UQ90 795 aa7.87□□□□□ -1.15
ITGB1-208ENST00000464001 LRRC14Q15048 493 aa7.86□□□□□ -1.15
ITGB1-208ENST00000464001 STK11IPQ8N1F8 1099 aa7.86□□□□□ -1.15
ITGB1-208ENST00000464001 RNF214Q8ND24 703 aa7.86□□□□□ -1.15
ITGB1-208ENST00000464001 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
ITGB1-208ENST00000464001 WWC3Q9ULE0 1092 aa7.86□□□□□ -1.15
ITGB1-208ENST00000464001 ENC1O14682 589 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 BMP6P22004 513 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 NFXL1Q6ZNB6 911 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.85□□□□□ -1.15
ITGB1-208ENST00000464001 ANKRD24Q8TF21 1146 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 FMNL2Q96PY5 1086 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 SETDB2Q96T68 719 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 CACNA2D2Q9NY47 1150 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 SLC5A6Q9Y289 635 aa7.85□□□□□ -1.15
ITGB1-208ENST00000464001 TRIM37O94972 964 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 NEFMP07197 916 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 ISL2Q96A47 359 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 MISP3Q96FF7 219 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 FRMD6Q96NE9 622 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 C12orf49Q9H741 205 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 PAK6Q9NQU5 681 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-208ENST00000464001 FAM8A1Q9UBU6 413 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 RNF114Q9Y508 228 aa7.84□□□□□ -1.15
ITGB1-208ENST00000464001 SCARA3Q6AZY7 606 aa7.83□□□□□ -1.16
ITGB1-208ENST00000464001 LLGL2Q6P1M3 1020 aa7.83□□□□□ -1.16
ITGB1-208ENST00000464001 ARHGAP27Q6ZUM4 889 aa7.83□□□□□ -1.16
ITGB1-208ENST00000464001 GRIN3AQ8TCU5 1115 aa7.83□□□□□ -1.16
ITGB1-208ENST00000464001 NETO1Q8TDF5 533 aa7.83□□□□□ -1.16
ITGB1-208ENST00000464001 BCL7CQ8WUZ0 217 aaPredicted RBP7.83□□□□□ -1.16
ITGB1-208ENST00000464001 DUSP23Q9BVJ7 150 aa7.83□□□□□ -1.16
ITGB1-208ENST00000464001 PICK1Q9NRD5 415 aa7.83□□□□□ -1.16
ITGB1-208ENST00000464001 FBXO24O75426 580 aa7.82□□□□□ -1.16
ITGB1-208ENST00000464001 PAGE1O75459 146 aa7.82□□□□□ -1.16
ITGB1-208ENST00000464001 LDHBP07195 334 aaKnown RBP7.82□□□□□ -1.16
ITGB1-208ENST00000464001 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
ITGB1-208ENST00000464001 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
ITGB1-208ENST00000464001 GOLGA2P5Q9HBQ8 144 aa7.82□□□□□ -1.16
ITGB1-208ENST00000464001 CYP8B1Q9UNU6 501 aa7.82□□□□□ -1.16
ITGB1-208ENST00000464001 LEFTY1O75610 366 aa7.81□□□□□ -1.16
ITGB1-208ENST00000464001 P4HBP07237 508 aaKnown RBP7.81□□□□□ -1.16
ITGB1-208ENST00000464001 PPM1JQ5JR12 505 aa7.81□□□□□ -1.16
ITGB1-208ENST00000464001 CBLL1Q75N03 491 aa7.81□□□□□ -1.16
ITGB1-208ENST00000464001 KRTAP4-12Q9BQ66 201 aa7.81□□□□□ -1.16
ITGB1-208ENST00000464001 DCDC2CA8MYV0 355 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 USP17L7P0C7H9 530 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 FGD1P98174 961 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 PLD6Q8N2A8 252 aaKnown RBP7.8□□□□□ -1.16
ITGB1-208ENST00000464001 TOP6BLQ8N6T0 577 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 FAM181AQ8N9Y4 354 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 VAV3Q9UKW4 847 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 PCDHA4Q9UN74 947 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 CSADQ9Y600 493 aa7.8□□□□□ -1.16
ITGB1-208ENST00000464001 FANCGO15287 622 aa7.79□□□□□ -1.16
ITGB1-208ENST00000464001 IFI16Q16666 785 aaKnown RBP7.79□□□□□ -1.16
ITGB1-208ENST00000464001 PCNX4Q63HM2 1172 aa7.79□□□□□ -1.16
ITGB1-208ENST00000464001 SV2BQ7L1I2 683 aa7.79□□□□□ -1.16
ITGB1-208ENST00000464001 CDC37L1Q7L3B6 337 aa7.79□□□□□ -1.16
ITGB1-208ENST00000464001 C12orf40Q86WS4 652 aa7.79□□□□□ -1.16
ITGB1-208ENST00000464001 KCT2Q8NC54 265 aa7.79□□□□□ -1.16
ITGB1-208ENST00000464001 CELA3AP09093 270 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 EIF4BP23588 611 aaKnown RBP7.78□□□□□ -1.16
ITGB1-208ENST00000464001 PRKCQQ04759 706 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 RING1Q06587 406 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 BNIP3Q12983 259 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 COL19A1Q14993 1142 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 PLCL1Q15111 1095 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
ITGB1-208ENST00000464001 SPRED2Q7Z698 418 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 ELMO3Q96BJ8 720 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 ASIC4Q96FT7 647 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 GTF2IRD1Q9UHL9 959 aa7.78□□□□□ -1.16
ITGB1-208ENST00000464001 TTF2Q9UNY4 1162 aaKnown RBP7.78□□□□□ -1.16
ITGB1-208ENST00000464001 TMEM265A0A087WTH1 108 aa7.77□□□□□ -1.17
ITGB1-208ENST00000464001 CEACAM5P06731 702 aa7.77□□□□□ -1.17
ITGB1-208ENST00000464001 JUNBP17275 347 aaPredicted RBP7.77□□□□□ -1.17
ITGB1-208ENST00000464001 GNA15P30679 374 aa7.77□□□□□ -1.17
ITGB1-208ENST00000464001 OXCT1P55809 520 aa7.77□□□□□ -1.17
ITGB1-208ENST00000464001 ZBTB37Q5TC79 503 aa7.77□□□□□ -1.17
ITGB1-208ENST00000464001 RASIP1Q5U651 963 aa7.77□□□□□ -1.17
ITGB1-208ENST00000464001 PRDM10Q9NQV6 1147 aa7.77□□□□□ -1.17
ITGB1-208ENST00000464001 PRPF40AO75400 957 aaKnown RBP7.76□□□□□ -1.17
ITGB1-208ENST00000464001 NTF4P34130 210 aa7.76□□□□□ -1.17
ITGB1-208ENST00000464001 ZNF507Q8TCN5 953 aa7.76□□□□□ -1.17
ITGB1-208ENST00000464001 HRASLS5Q96KN8 279 aa7.76□□□□□ -1.17
ITGB1-208ENST00000464001 IGF2BP3O00425 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
ITGB1-208ENST00000464001 CD8BP10966 210 aa7.75□□□□□ -1.17
ITGB1-208ENST00000464001 ITGB5P18084 799 aa7.75□□□□□ -1.17
ITGB1-208ENST00000464001 AOC3Q16853 763 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms