RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SREBF2Q12772 1141 aa15.84■□□□□ 0.13
XRN1-203ENST00000463916 DCAF15Q66K64 600 aa15.84■□□□□ 0.13
XRN1-203ENST00000463916 SH3RF3Q8TEJ3 882 aaPredicted RBP15.84■□□□□ 0.13
XRN1-203ENST00000463916 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
XRN1-203ENST00000463916 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
XRN1-203ENST00000463916 R3HDMLQ9H3Y0 253 aa15.84■□□□□ 0.13
XRN1-203ENST00000463916 AATFQ9NY61 560 aaKnown RBP eCLIP15.84■□□□□ 0.13
XRN1-203ENST00000463916 IDH1O75874 414 aaKnown RBP15.83■□□□□ 0.13
XRN1-203ENST00000463916 MS4A4AQ96JQ5 239 aa15.83■□□□□ 0.13
XRN1-203ENST00000463916 PTPN18Q99952 460 aa15.83■□□□□ 0.13
XRN1-203ENST00000463916 ZNF341Q9BYN7 854 aa15.83■□□□□ 0.13
XRN1-203ENST00000463916 DCTPP1Q9H773 170 aa15.83■□□□□ 0.13
XRN1-203ENST00000463916 ZNF112Q9UJU3 913 aa15.83■□□□□ 0.13
XRN1-203ENST00000463916 CSADQ9Y600 493 aa15.83■□□□□ 0.13
XRN1-203ENST00000463916 MANSC4A6NHS7 340 aaPredicted RBP15.83■□□□□ 0.12
XRN1-203ENST00000463916 IGF2BP3O00425 579 aaKnown RBP eCLIP15.83■□□□□ 0.12
XRN1-203ENST00000463916 ZSCAN29Q8IWY8 852 aaPredicted RBP15.83■□□□□ 0.12
XRN1-203ENST00000463916 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
XRN1-203ENST00000463916 LRRCC1Q9C099 1032 aa15.83■□□□□ 0.12
XRN1-203ENST00000463916 IFNL1Q8IU54 200 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 LAMB1P07942 1786 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 MAST2Q6P0Q8 1798 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 SPDYE5A6NIY4 337 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 PHF20L1A8MW92 1017 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 INHBEP58166 350 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 PPP4CP60510 307 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 MAP3K10Q02779 954 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 TEX11Q8IYF3 940 aa15.82■□□□□ 0.12
XRN1-203ENST00000463916 EDC3Q96F86 508 aaKnown RBP15.82■□□□□ 0.12
XRN1-203ENST00000463916 TESPA1A2RU30 521 aaPredicted RBP15.81■□□□□ 0.12
XRN1-203ENST00000463916 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
XRN1-203ENST00000463916 CYP7A1P22680 504 aa15.81■□□□□ 0.12
XRN1-203ENST00000463916 DYNLL1P63167 89 aaKnown RBP15.81■□□□□ 0.12
XRN1-203ENST00000463916 MAGEB6Q8N7X4 407 aa15.81■□□□□ 0.12
XRN1-203ENST00000463916 IRF6O14896 467 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 MAP4K4O95819 1239 aaPredicted RBP15.8■□□□□ 0.12
XRN1-203ENST00000463916 ERO1BQ86YB8 467 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 MIGA1Q8NAN2 632 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 DNAJC2Q99543 621 aaKnown RBP15.8■□□□□ 0.12
XRN1-203ENST00000463916 OSBPL5Q9H0X9 879 aaPredicted RBP15.8■□□□□ 0.12
XRN1-203ENST00000463916 FAM196BA6NMK8 535 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 GOLIM4O00461 696 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 BAG3O95817 575 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.8■□□□□ 0.12
XRN1-203ENST00000463916 TGFBRAP1Q8WUH2 860 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 BRI3BPQ8WY22 251 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 BOLA2Q9H3K6 86 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 DOCK2Q92608 1830 aa15.8■□□□□ 0.12
XRN1-203ENST00000463916 ATP5JP18859 108 aa15.79■□□□□ 0.12
XRN1-203ENST00000463916 NOL10Q9BSC4 688 aaKnown RBP15.79■□□□□ 0.12
XRN1-203ENST00000463916 IGSF3O75054 1194 aa15.79■□□□□ 0.12
XRN1-203ENST00000463916 MAP3K12Q12852 859 aa15.79■□□□□ 0.12
XRN1-203ENST00000463916 MAPKAPK5Q8IW41 473 aa15.79■□□□□ 0.12
XRN1-203ENST00000463916 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
XRN1-203ENST00000463916 CDK5RAP2Q96SN8 1893 aa15.78■□□□□ 0.12
XRN1-203ENST00000463916 CAPN15O75808 1086 aa15.78■□□□□ 0.12
XRN1-203ENST00000463916 SLFNL1Q499Z3 407 aa15.78■□□□□ 0.12
XRN1-203ENST00000463916 ZNF296Q8WUU4 475 aaPredicted RBP15.78■□□□□ 0.12
XRN1-203ENST00000463916 FLT1P17948 1338 aa15.78■□□□□ 0.12
XRN1-203ENST00000463916 CCL15-CCL14A0A0B4J2E2 113 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 GPR25O00155 361 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 PLCG2P16885 1265 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 GTF2A2P52657 109 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 PPATQ06203 517 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 PPIL2Q13356 520 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.12
XRN1-203ENST00000463916 CCL15Q16663 113 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 NOL9Q5SY16 702 aaKnown RBP15.77■□□□□ 0.12
XRN1-203ENST00000463916 SLC9C2Q5TAH2 1124 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.12
XRN1-203ENST00000463916 HTTP42858 3142 aa15.77■□□□□ 0.12
XRN1-203ENST00000463916 ALDH1A1P00352 501 aa15.77■□□□□ 0.11
XRN1-203ENST00000463916 CHGBP05060 677 aa15.77■□□□□ 0.11
XRN1-203ENST00000463916 PDE6AP16499 860 aa15.77■□□□□ 0.11
XRN1-203ENST00000463916 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.11
XRN1-203ENST00000463916 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.11
XRN1-203ENST00000463916 HAUS7Q99871 368 aa15.77■□□□□ 0.11
XRN1-203ENST00000463916 PAG1Q9NWQ8 432 aa15.77■□□□□ 0.11
XRN1-203ENST00000463916 CENPFP49454 3210 aa15.77■□□□□ 0.11
XRN1-203ENST00000463916 COL2A1P02458 1487 aaPredicted RBP15.76■□□□□ 0.11
XRN1-203ENST00000463916 TCRBV5S4A2TA0A5A2 114 aa15.76■□□□□ 0.11
XRN1-203ENST00000463916 TBC1D12O60347 775 aa15.76■□□□□ 0.11
XRN1-203ENST00000463916 CRHR2Q13324 411 aa15.76■□□□□ 0.11
XRN1-203ENST00000463916 TSHZ3Q63HK5 1081 aa15.76■□□□□ 0.11
XRN1-203ENST00000463916 RIOK1Q9BRS2 568 aaKnown RBP15.76■□□□□ 0.11
XRN1-203ENST00000463916 MCOLN1Q9GZU1 580 aa15.76■□□□□ 0.11
XRN1-203ENST00000463916 PALD1Q9ULE6 856 aa15.76■□□□□ 0.11
XRN1-203ENST00000463916 SCYL3Q8IZE3 742 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.75■□□□□ 0.11
XRN1-203ENST00000463916 ZNF532Q9HCE3 1301 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 FOCADQ5VW36 1801 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 SNAPC2Q13487 334 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 DGKZQ13574 1117 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 SLC4A8Q2Y0W8 1093 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 NOM1Q5C9Z4 860 aaKnown RBP15.75■□□□□ 0.11
XRN1-203ENST00000463916 CCDC84Q86UT8 332 aaPredicted RBP15.75■□□□□ 0.11
XRN1-203ENST00000463916 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
XRN1-203ENST00000463916 ZHX2Q9Y6X8 837 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 SIPA1L1O43166 1804 aa15.75■□□□□ 0.11
XRN1-203ENST00000463916 CTNND1O60716 968 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms