RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 UNCXA6NJT0 531 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 ANP32AP39687 249 aaKnown RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 FGD1P98174 961 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 BECN1Q14457 450 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 RABEP1Q15276 862 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 KIF4BQ2VIQ3 1234 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 DCAF15Q66K64 600 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 CDC42EP5Q6NZY7 148 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 SKAP1Q86WV1 359 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 IQCA1Q86XH1 822 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 TGFBRAP1Q8WUH2 860 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 ESR2Q92731 530 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 KCNB2Q92953 911 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 PRMT6Q96LA8 375 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 LSG1Q9H089 658 aaKnown RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 DCP1AQ9NPI6 582 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 ZNF70Q9UC06 446 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 ZBTB12Q9Y330 459 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 RBM8AQ9Y5S9 174 aaKnown RBP8.77□□□□□ -1.01
EPHA4-210ENST00000463446 CYP46A1Q9Y6A2 500 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 AKAP11Q9UKA4 1901 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1.01
EPHA4-210ENST00000463446 MINDY4BA8MYZ0 360 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 USP17L12C9JPN9 530 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 USP17L21D6R901 530 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 M0R2C6 588 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 WNT10BO00744 389 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 TBC1D12O60347 775 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 DDNO94850 711 aaPredicted RBP8.76□□□□□ -1.01
EPHA4-210ENST00000463446 MCM5P33992 734 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 PPP2R5BQ15173 497 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 AKNAD1Q5T1N1 836 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
EPHA4-210ENST00000463446 C12orf60Q5U649 245 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 CTR9Q6PD62 1173 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 CDC37L1Q7L3B6 337 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 SULF1Q8IWU6 871 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 LCORLQ8N3X6 602 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 CRACR2BQ8N4Y2 399 aaPredicted RBP8.76□□□□□ -1.01
EPHA4-210ENST00000463446 SH3RF3Q8TEJ3 882 aaPredicted RBP8.76□□□□□ -1.01
EPHA4-210ENST00000463446 IL17RAQ96F46 866 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 TTC14Q96N46 770 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 TBC1D32Q96NH3 1257 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 NEK1Q96PY6 1258 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 SEC62Q99442 399 aaKnown RBP8.76□□□□□ -1.01
EPHA4-210ENST00000463446 EHD4Q9H223 541 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 ALDH8A1Q9H2A2 487 aaPredicted RBP8.76□□□□□ -1.01
EPHA4-210ENST00000463446 TDRD3Q9H7E2 651 aaKnown RBP8.76□□□□□ -1.01
EPHA4-210ENST00000463446 CABP5Q9NP86 173 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 SERPINB13Q9UIV8 391 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 CACNA1SQ13698 1873 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 WDR19Q8NEZ3 1342 aa8.76□□□□□ -1.01
EPHA4-210ENST00000463446 EPHX2P34913 555 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 RHBDL3P58872 404 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 PPARAQ07869 468 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 CREB3L3Q68CJ9 461 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 BLOC1S2Q6QNY1 142 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
EPHA4-210ENST00000463446 ZNF589Q86UQ0 364 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-210ENST00000463446 STAG1Q8WVM7 1258 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 ZBED3Q96IU2 234 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-210ENST00000463446 TMEM87BQ96K49 555 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 OSBPL5Q9H0X9 879 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-210ENST00000463446 PGAP2Q9UHJ9 254 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 AK9Q5TCS8 1911 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 COL4A1P02462 1669 aa8.75□□□□□ -1.01
EPHA4-210ENST00000463446 MYH13Q9UKX3 1938 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 A0A1B0GUL6 1792 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 SLC27A2O14975 620 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 DHX16O60231 1041 aaKnown RBP8.74□□□□□ -1.01
EPHA4-210ENST00000463446 PPP1R12BO60237 982 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-210ENST00000463446 FGRP09769 529 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 DYNLL1P63167 89 aaKnown RBP8.74□□□□□ -1.01
EPHA4-210ENST00000463446 PTH1RQ03431 593 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 RUFY3Q7L099 469 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 ADGRA1Q86SQ6 560 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 FBXL16Q8N461 479 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 ZSCAN31Q96LW9 406 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-210ENST00000463446 MXD3Q9BW11 206 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 VEZTQ9HBM0 779 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 TOMM22Q9NS69 142 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 MKRN1Q9UHC7 482 aaKnown RBP8.74□□□□□ -1.01
EPHA4-210ENST00000463446 SYNPO2Q9UMS6 1093 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 CLEC11AQ9Y240 323 aa8.74□□□□□ -1.01
EPHA4-210ENST00000463446 COL2A1P02458 1487 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-210ENST00000463446 CCDC196A0A1B0GTZ2 297 aa8.73□□□□□ -1.01
EPHA4-210ENST00000463446 ORC4O43929 436 aa8.73□□□□□ -1.01
EPHA4-210ENST00000463446 WDHD1O75717 1129 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-210ENST00000463446 CALM1P0DP23 149 aa8.73□□□□□ -1.01
EPHA4-210ENST00000463446 CALM2P0DP24 149 aa8.73□□□□□ -1.01
EPHA4-210ENST00000463446 CALM3P0DP25 149 aa8.73□□□□□ -1.01
EPHA4-210ENST00000463446 EPS15P42566 896 aa8.73□□□□□ -1.01
EPHA4-210ENST00000463446 NEK4P51957 841 aa8.73□□□□□ -1.01
EPHA4-210ENST00000463446 MAP3K10Q02779 954 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms