RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 POTEIP0CG38 1075 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 POTEJP0CG39 1038 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 USP5P45974 858 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 FAM83AQ86UY5 434 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 BACH2Q9BYV9 841 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 TMOD2Q9NZR1 351 aa16.62■□□□□ 0.25
PHACTR4-203ENST00000463428 FGAP02671 866 aa16.61■□□□□ 0.25
PHACTR4-203ENST00000463428 PICALMQ13492 652 aa16.61■□□□□ 0.25
PHACTR4-203ENST00000463428 SH3BP5LQ7L8J4 393 aa16.61■□□□□ 0.25
PHACTR4-203ENST00000463428 FAM151AQ8WW52 585 aa16.61■□□□□ 0.25
PHACTR4-203ENST00000463428 OSBPL5Q9H0X9 879 aaPredicted RBP16.61■□□□□ 0.25
PHACTR4-203ENST00000463428 VEZTQ9HBM0 779 aa16.61■□□□□ 0.25
PHACTR4-203ENST00000463428 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
PHACTR4-203ENST00000463428 ZMYM6O95789 1325 aa16.6■□□□□ 0.25
PHACTR4-203ENST00000463428 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
PHACTR4-203ENST00000463428 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
PHACTR4-203ENST00000463428 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
PHACTR4-203ENST00000463428 USP26Q9BXU7 913 aa16.6■□□□□ 0.25
PHACTR4-203ENST00000463428 SCAF8Q9UPN6 1271 aaKnown RBP16.6■□□□□ 0.25
PHACTR4-203ENST00000463428 COL2A1P02458 1487 aaPredicted RBP16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 REC8O95072 547 aa16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 APPP05067 770 aa16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 TCP10Q12799 353 aa16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 RASA3Q14644 834 aa16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 SBK1Q52WX2 424 aa16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 APOBEC3FQ8IUX4 373 aaKnown RBP16.59■□□□□ 0.25
PHACTR4-203ENST00000463428 SIPA1L1O43166 1804 aa16.58■□□□□ 0.25
PHACTR4-203ENST00000463428 DDTLA6NHG4 134 aaPredicted RBP16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 USP17L12C9JPN9 530 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 USP17L21D6R901 530 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 SMIM22K7EJ46 135 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 EVX2Q03828 476 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 RBM8AQ9Y5S9 174 aaKnown RBP16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 ATRNL1Q5VV63 1379 aa16.58■□□□□ 0.24
PHACTR4-203ENST00000463428 KIF3CO14782 793 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 CYP2D6P10635 497 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 YY1P25490 414 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 TDO2P48775 406 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 TNNI2P48788 182 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 C12orf60Q5U649 245 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 LDHDQ86WU2 507 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 DCPSQ96C86 337 aaKnown RBP16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 NAPBQ9H115 298 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 SAP30BPQ9UHR5 308 aaKnown RBP16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 LAMB1P07942 1786 aa16.57■□□□□ 0.24
PHACTR4-203ENST00000463428 LAMA4Q16363 1823 aa16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 CYP2D7A0A087X1C5 515 aa16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 EIF5BO60841 1220 aaKnown RBP16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 PLCD1P51178 756 aa16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 PPP2R3BQ9Y5P8 575 aa16.56■□□□□ 0.24
PHACTR4-203ENST00000463428 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
PHACTR4-203ENST00000463428 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
PHACTR4-203ENST00000463428 KCNB2Q92953 911 aa16.55■□□□□ 0.24
PHACTR4-203ENST00000463428 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
PHACTR4-203ENST00000463428 ANAPC4Q9UJX5 808 aa16.55■□□□□ 0.24
PHACTR4-203ENST00000463428 CLEC11AQ9Y240 323 aa16.55■□□□□ 0.24
PHACTR4-203ENST00000463428 ADM5C9JUS6 153 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 CYP21A2P08686 494 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 HSPA4P34932 840 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 MAP1SQ66K74 1059 aaPredicted RBP16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 KRT26Q7Z3Y9 468 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 TTC6Q86TZ1 520 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 SULF1Q8IWU6 871 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 ZNF784Q8NCA9 323 aaPredicted RBP16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 NBPF3Q9H094 633 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
PHACTR4-203ENST00000463428 MINDY4BA8MYZ0 360 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 SLC27A2O14975 620 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 SLURP2P0DP57 97 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 GABPAQ06546 454 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 PPARAQ07869 468 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 NBPF12Q5TAG4 269 aaPredicted RBP16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 PRAMEF18Q5VWM3 479 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 CREB3L3Q68CJ9 461 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 PI4KBQ9UBF8 816 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 TAF6LQ9Y6J9 622 aa16.53■□□□□ 0.24
PHACTR4-203ENST00000463428 ROBO3Q96MS0 1386 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms