RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 USP17L18D6R9N7 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L22D6RA61 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L17D6RBQ6 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L19D6RCP7 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L20D6RJB6 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SNX2O60749 519 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SKILP12757 684 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 TRPC1P48995 793 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 BPIFB3P59826 476 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 USP17L24Q0WX57 530 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 PPP1R15BQ5SWA1 713 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 TAF3Q5VWG9 929 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 ZNF449Q6P9G9 518 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 RIC3Q7Z5B4 369 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 LCA5Q86VQ0 697 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 RASSF3Q86WH2 238 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 IPCEF1Q8WWN9 437 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 TBC1D31Q96DN5 1066 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 PHACTR3Q96KR7 559 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 ZIM2Q9NZV7 527 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SUN2Q9UH99 717 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SBNO1A3KN83 1393 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 PHRF1Q9P1Y6 1649 aaKnown RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 CCDC85CA6NKD9 419 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 HTATSF1O43719 755 aaKnown RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 TCEA3O75764 348 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 RLBP1P12271 317 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SARSP49591 514 aaKnown RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 ST13P50502 369 aaKnown RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 CHMP4BP1P59074 171 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 HYIQ5T013 277 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 ILDR2Q71H61 639 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 DZIP3Q86Y13 1208 aaKnown RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 ZSCAN29Q8IWY8 852 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SH3GLB2Q9NR46 395 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 MRGBPQ9NV56 204 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 TBK1Q9UHD2 729 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 NWD1Q149M9 1564 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 KIAA0232Q92628 1395 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 MNX1P50219 401 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 NUCB1Q02818 461 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 MECOMQ03112 1051 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 C8orf34Q49A92 452 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 TMC7Q7Z402 723 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 KCNH5Q8NCM2 988 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SMARCC1Q92922 1105 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 MS4A4AQ96JQ5 239 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SELENOOQ9BVL4 669 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 CCDC94Q9BW85 323 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 SRA1Q9HD15 236 aaKnown RBP6.29□□□□□ -1.4
TRA2B-207ENST00000463328 GINM1Q9NU53 330 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 MKS1Q9NXB0 559 aa6.29□□□□□ -1.4
TRA2B-207ENST00000463328 PIK3C2AO00443 1686 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 HAX1O00165 279 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 SORBS3O60504 671 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 AGR2O95994 175 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 TRIM27P14373 513 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 EIF4A2Q14240 407 aaKnown RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 RASGRP2Q7LDG7 609 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 CPXCR1Q8N123 301 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 FRAT1Q92837 279 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 FAM210AQ96ND0 272 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 MAP3K14Q99558 947 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 SLKQ9H2G2 1235 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 C19orf44Q9H6X5 657 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 SMC4Q9NTJ3 1288 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 ZBTB40Q9NUA8 1239 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 VTI1BQ9UEU0 232 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 ZRANB1Q9UGI0 708 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 PCDHB15Q9Y5E8 787 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 SOS1Q07889 1333 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 DCCP43146 1447 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 CACNA1FO60840 1977 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 MOXD2PA6NHM9 499 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 MPHOSPH10O00566 681 aaKnown RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 HALP42357 657 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 EPHB1P54762 984 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 MORC3Q14149 939 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 PPP4R3AQ6IN85 833 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 CAPN12Q6ZSI9 719 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 ARHGEF25Q86VW2 580 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 SAMD14Q8IZD0 417 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 MRPL50Q8N5N7 158 aaKnown RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 FBXO41Q8TF61 875 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 ABCG4Q9H172 646 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 ZNF408Q9H9D4 720 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 ZSWIM6Q9HCJ5 1215 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 BABAM1Q9NWV8 329 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 FBXO2Q9UK22 296 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-207ENST00000463328 FLT4P35916 1363 aa6.28□□□□□ -1.4
TRA2B-207ENST00000463328 NBPF7P0C2Y1 421 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-207ENST00000463328 NLRP6P59044 892 aa6.27□□□□□ -1.41
TRA2B-207ENST00000463328 WDR45BQ5MNZ6 344 aa6.27□□□□□ -1.41
TRA2B-207ENST00000463328 IQCF2Q8IXL9 164 aa6.27□□□□□ -1.41
TRA2B-207ENST00000463328 OR8H2Q8N162 312 aa6.27□□□□□ -1.41
TRA2B-207ENST00000463328 RTL1A6NKG5 1358 aa6.27□□□□□ -1.41
TRA2B-207ENST00000463328 USP17L3A6NCW0 530 aa6.27□□□□□ -1.41
TRA2B-207ENST00000463328 USP17L4A6NCW7 530 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms