RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 SHROOM1Q2M3G4 852 aaPredicted RBP7.06□□□□□ -1.28
CCR9-205ENST00000463197 POTEEQ6S8J3 1075 aa7.06□□□□□ -1.28
CCR9-205ENST00000463197 ANKRD23Q86SG2 305 aa7.06□□□□□ -1.28
CCR9-205ENST00000463197 ADGRA1Q86SQ6 560 aa7.06□□□□□ -1.28
CCR9-205ENST00000463197 MIER1Q8N108 512 aa7.06□□□□□ -1.28
CCR9-205ENST00000463197 TMEM57Q8N5G2 664 aa7.06□□□□□ -1.28
CCR9-205ENST00000463197 NSUN4Q96CB9 384 aaKnown RBP7.06□□□□□ -1.28
CCR9-205ENST00000463197 GABRQQ9UN88 632 aa7.06□□□□□ -1.28
CCR9-205ENST00000463197 RANBP2P49792 3224 aaKnown RBP7.06□□□□□ -1.28
CCR9-205ENST00000463197 RPAP1Q9BWH6 1393 aaPredicted RBP7.06□□□□□ -1.28
CCR9-205ENST00000463197 MAST3O60307 1309 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 ARAP2Q8WZ64 1704 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 SEMA3EO15041 775 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 ZBTB7BO15156 539 aaPredicted RBP7.05□□□□□ -1.28
CCR9-205ENST00000463197 PEX10O60683 326 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 ENTPD3O75355 529 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 OSBPP22059 807 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 BTDP43251 543 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 PSMC4P43686 418 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 POLA2Q14181 598 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 ATF7IPQ6VMQ6 1270 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 SHISA4Q96DD7 197 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 NEUROD6Q96NK8 337 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 C1orf115Q9H7X2 142 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 ZCCHC17Q9NP64 241 aaKnown RBP7.05□□□□□ -1.28
CCR9-205ENST00000463197 SNRKQ9NRH2 765 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 TMOD2Q9NZR1 351 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 ABCF2Q9UG63 623 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 ZHX2Q9Y6X8 837 aa7.05□□□□□ -1.28
CCR9-205ENST00000463197 A0A0G2JLL6 359 aaPredicted RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 CXCL11O14625 94 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 CYP2E1P05181 493 aaPredicted RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 ARID4AP29374 1257 aaPredicted RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 ATP8B2P98198 1209 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 PICALMQ13492 652 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 TREML2Q5T2D2 321 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 DCAF15Q66K64 600 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 UBE2Q1Q7Z7E8 422 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 SCYL3Q8IZE3 742 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 SPATA5Q8NB90 893 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 SH3RF3Q8TEJ3 882 aaPredicted RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 FRAT1Q92837 279 aaPredicted RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 DBNDD2Q9BQY9 259 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 DNAJC18Q9H819 358 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 GNL3LQ9NVN8 582 aaKnown RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 TLR7Q9NYK1 1049 aaKnown RBP7.04□□□□□ -1.28
CCR9-205ENST00000463197 NDUFB9Q9Y6M9 179 aa7.04□□□□□ -1.28
CCR9-205ENST00000463197 MROH7-TTC4A0A0A0MT08 1334 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 PDS5AQ29RF7 1337 aaKnown RBP7.03□□□□□ -1.28
CCR9-205ENST00000463197 TBC1D12O60347 775 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 GNAI2P04899 355 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 GNAI3P08754 354 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 EVX2Q03828 476 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 PRKCZQ05513 592 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 SLC9C1Q4G0N8 1177 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 HABP4Q5JVS0 413 aaKnown RBP7.03□□□□□ -1.28
CCR9-205ENST00000463197 ERICH6Q7L0X2 663 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 SSH3Q8TE77 659 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 EAF2Q96CJ1 260 aaPredicted RBP7.03□□□□□ -1.28
CCR9-205ENST00000463197 PIH1D3Q9NQM4 214 aaKnown RBP7.03□□□□□ -1.28
CCR9-205ENST00000463197 PCDH10Q9P2E7 1040 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 SRRDQ9UH36 339 aa7.03□□□□□ -1.28
CCR9-205ENST00000463197 LAMA3Q16787 3333 aa7.02□□□□□ -1.29
CCR9-205ENST00000463197 TRIM75PA6NK02 468 aa7.02□□□□□ -1.29
CCR9-205ENST00000463197 CTNND1O60716 968 aaKnown RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 NPM3O75607 178 aaKnown RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 ZAP70P43403 619 aa7.02□□□□□ -1.29
CCR9-205ENST00000463197 DYNLL1P63167 89 aaKnown RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 TNNI3KQ59H18 835 aa7.02□□□□□ -1.29
CCR9-205ENST00000463197 METTL16Q86W50 562 aaKnown RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 DZIP1Q86YF9 867 aaKnown RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 CCDC8Q9H0W5 538 aaPredicted RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 OSBPL5Q9H0X9 879 aaPredicted RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 ANTXR1Q9H6X2 564 aa7.02□□□□□ -1.29
CCR9-205ENST00000463197 DBNLQ9UJU6 430 aaKnown RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 COLQQ9Y215 455 aaPredicted RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 AKAP2Q9Y2D5 859 aa7.02□□□□□ -1.29
CCR9-205ENST00000463197 NOP58Q9Y2X3 529 aaKnown RBP7.02□□□□□ -1.29
CCR9-205ENST00000463197 FPGT-TNNI3KV9GXZ4 949 aa7.02□□□□□ -1.29
CCR9-205ENST00000463197 H0YGN5 161 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 FMNL1O95466 1100 aaPredicted RBP7.01□□□□□ -1.29
CCR9-205ENST00000463197 ELNP15502 786 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 MNX1P50219 401 aaPredicted RBP7.01□□□□□ -1.29
CCR9-205ENST00000463197 PPP4CP60510 307 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 TRIM32Q13049 653 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 SPP2Q13103 211 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 G3BP1Q13283 466 aaKnown RBP eCLIP7.01□□□□□ -1.29
CCR9-205ENST00000463197 MVPQ14764 893 aaKnown RBP7.01□□□□□ -1.29
CCR9-205ENST00000463197 SLC4A8Q2Y0W8 1093 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 Q3C1V9 767 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 ZSCAN29Q8IWY8 852 aaPredicted RBP7.01□□□□□ -1.29
CCR9-205ENST00000463197 SIRT2Q8IXJ6 389 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 ZGPATQ8N5A5 531 aaKnown RBP7.01□□□□□ -1.29
CCR9-205ENST00000463197 HOOK2Q96ED9 719 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 TMEM106CQ9BVX2 250 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 UNC93B1Q9H1C4 597 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 AATFQ9NY61 560 aaKnown RBP eCLIP7.01□□□□□ -1.29
CCR9-205ENST00000463197 GJD2Q9UKL4 321 aa7.01□□□□□ -1.29
CCR9-205ENST00000463197 MYPNQ86TC9 1320 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms