RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 MAP3K10Q02779 954 aa24.53■■□□□ 1.52
VARS-221ENST00000463184 SPTY2D1Q68D10 685 aaPredicted RBP24.53■■□□□ 1.52
VARS-221ENST00000463184 ZHX2Q9Y6X8 837 aa24.53■■□□□ 1.52
VARS-221ENST00000463184 A0A0G2JLL6 359 aaPredicted RBP24.52■■□□□ 1.52
VARS-221ENST00000463184 BCRP11274 1271 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 PTPRAP18433 802 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 RASGRF1Q13972 1273 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 MTFR1Q15390 333 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 PRRT2Q7Z6L0 340 aaPredicted RBP24.52■■□□□ 1.52
VARS-221ENST00000463184 ZSCAN29Q8IWY8 852 aaPredicted RBP24.52■■□□□ 1.52
VARS-221ENST00000463184 NKX2-3Q8TAU0 364 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 MEIS3Q99687 375 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 ABCF2Q9UG63 623 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 AKAP2Q9Y2D5 859 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 MYPNQ86TC9 1320 aa24.52■■□□□ 1.52
VARS-221ENST00000463184 MYH2Q9UKX2 1941 aa24.51■■□□□ 1.51
VARS-221ENST00000463184 CYP2C8P10632 490 aa24.51■■□□□ 1.51
VARS-221ENST00000463184 FCGRTP55899 365 aa24.51■■□□□ 1.51
VARS-221ENST00000463184 AFG3L2Q9Y4W6 797 aa24.51■■□□□ 1.51
VARS-221ENST00000463184 SH3BP5LQ7L8J4 393 aa24.5■■□□□ 1.51
VARS-221ENST00000463184 ARHGAP45Q92619 1136 aa24.5■■□□□ 1.51
VARS-221ENST00000463184 SLC45A1Q9Y2W3 748 aa24.5■■□□□ 1.51
VARS-221ENST00000463184 RFX7Q2KHR2 1363 aa24.5■■□□□ 1.51
VARS-221ENST00000463184 A0A1B0GUL7 405 aa24.49■■□□□ 1.51
VARS-221ENST00000463184 DDTLA6NHG4 134 aaPredicted RBP24.49■■□□□ 1.51
VARS-221ENST00000463184 CTNND1O60716 968 aaKnown RBP24.49■■□□□ 1.51
VARS-221ENST00000463184 GNAI3P08754 354 aa24.49■■□□□ 1.51
VARS-221ENST00000463184 BTDP43251 543 aa24.49■■□□□ 1.51
VARS-221ENST00000463184 MVPQ14764 893 aaKnown RBP24.49■■□□□ 1.51
VARS-221ENST00000463184 XAGE2Q96GT9 111 aa24.49■■□□□ 1.51
VARS-221ENST00000463184 COLQQ9Y215 455 aaPredicted RBP24.49■■□□□ 1.51
VARS-221ENST00000463184 SRGAP3O43295 1099 aa24.48■■□□□ 1.51
VARS-221ENST00000463184 RARSP54136 660 aaKnown RBP24.48■■□□□ 1.51
VARS-221ENST00000463184 UBXN2AP68543 259 aa24.48■■□□□ 1.51
VARS-221ENST00000463184 ERICH6Q7L0X2 663 aa24.48■■□□□ 1.51
VARS-221ENST00000463184 SHISA4Q96DD7 197 aa24.48■■□□□ 1.51
VARS-221ENST00000463184 DDX4Q9NQI0 724 aaKnown RBP24.48■■□□□ 1.51
VARS-221ENST00000463184 MROH7-TTC4A0A0A0MT08 1334 aa24.47■■□□□ 1.51
VARS-221ENST00000463184 GJA8P48165 433 aa24.47■■□□□ 1.51
VARS-221ENST00000463184 FXR1P51114 621 aaKnown RBP eCLIP24.47■■□□□ 1.51
VARS-221ENST00000463184 PRKCZQ05513 592 aa24.47■■□□□ 1.51
VARS-221ENST00000463184 TFCP2Q12800 502 aa24.47■■□□□ 1.51
VARS-221ENST00000463184 MTX1Q13505 466 aa24.47■■□□□ 1.51
VARS-221ENST00000463184 GADL1Q6ZQY3 521 aa24.47■■□□□ 1.51
VARS-221ENST00000463184 BIN2Q9UBW5 565 aaPredicted RBP24.47■■□□□ 1.51
VARS-221ENST00000463184 DOCK2Q92608 1830 aa24.47■■□□□ 1.51
VARS-221ENST00000463184 GPR75-ASB3A0A0A6YYF3 556 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 H0YGN5 161 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 TBC1D12O60347 775 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 NPM3O75607 178 aaKnown RBP24.46■■□□□ 1.51
VARS-221ENST00000463184 GJB1P08034 283 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 CCL5P13501 91 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 PICALMQ13492 652 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 SLAIN1Q8ND83 568 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 RNF208Q9H0X6 261 aa24.46■■□□□ 1.51
VARS-221ENST00000463184 MAP4K4O95819 1239 aaPredicted RBP24.45■■□□□ 1.5
VARS-221ENST00000463184 MECOMQ03112 1051 aa24.45■■□□□ 1.5
VARS-221ENST00000463184 LDHCP07864 332 aa24.44■■□□□ 1.5
VARS-221ENST00000463184 RHBDL3P58872 404 aa24.44■■□□□ 1.5
VARS-221ENST00000463184 DPF3Q92784 378 aa24.44■■□□□ 1.5
VARS-221ENST00000463184 NEUROD6Q96NK8 337 aa24.44■■□□□ 1.5
VARS-221ENST00000463184 GABRQQ9UN88 632 aa24.44■■□□□ 1.5
VARS-221ENST00000463184 SLURP2P0DP57 97 aa24.43■■□□□ 1.5
VARS-221ENST00000463184 GSTO1P78417 241 aa24.43■■□□□ 1.5
VARS-221ENST00000463184 SMCR8Q8TEV9 937 aaPredicted RBP24.43■■□□□ 1.5
VARS-221ENST00000463184 TRIM75PA6NK02 468 aa24.42■■□□□ 1.5
VARS-221ENST00000463184 HMG20BQ9P0W2 317 aa24.42■■□□□ 1.5
VARS-221ENST00000463184 AGTPBP1Q9UPW5 1226 aa24.42■■□□□ 1.5
VARS-221ENST00000463184 MGAMO43451 1857 aa24.41■■□□□ 1.5
VARS-221ENST00000463184 GORABQ5T7V8 394 aa24.41■■□□□ 1.5
VARS-221ENST00000463184 UBE2Q1Q7Z7E8 422 aa24.41■■□□□ 1.5
VARS-221ENST00000463184 SPATA5Q8NB90 893 aa24.41■■□□□ 1.5
VARS-221ENST00000463184 PXYLP1Q8TE99 480 aa24.41■■□□□ 1.5
VARS-221ENST00000463184 ZNF384Q8TF68 577 aa24.41■■□□□ 1.5
VARS-221ENST00000463184 NSUN4Q96CB9 384 aaKnown RBP24.41■■□□□ 1.5
VARS-221ENST00000463184 HTATIP2Q9BUP3 242 aa24.41■■□□□ 1.5
VARS-221ENST00000463184 OSBPL5Q9H0X9 879 aaPredicted RBP24.41■■□□□ 1.5
VARS-221ENST00000463184 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.41■■□□□ 1.5
VARS-221ENST00000463184 TNPO2O14787 897 aaKnown RBP24.4■■□□□ 1.5
VARS-221ENST00000463184 IPO8O15397 1037 aaKnown RBP24.4■■□□□ 1.5
VARS-221ENST00000463184 ADCY3O60266 1144 aa24.4■■□□□ 1.5
VARS-221ENST00000463184 FLT3LGP49771 235 aa24.4■■□□□ 1.5
VARS-221ENST00000463184 U2AF1L4Q8WU68 220 aaKnown RBP24.4■■□□□ 1.5
VARS-221ENST00000463184 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.4■■□□□ 1.5
VARS-221ENST00000463184 DOCK1Q14185 1865 aa24.4■■□□□ 1.5
VARS-221ENST00000463184 CAPN2P17655 700 aa24.39■■□□□ 1.49
VARS-221ENST00000463184 ARID4AP29374 1257 aaPredicted RBP24.39■■□□□ 1.49
VARS-221ENST00000463184 IRF5Q13568 498 aa24.39■■□□□ 1.49
VARS-221ENST00000463184 PROCA1Q8NCQ7 364 aaPredicted RBP24.39■■□□□ 1.49
VARS-221ENST00000463184 TBC1D2Q9BYX2 928 aa24.39■■□□□ 1.49
VARS-221ENST00000463184 UNC93B1Q9H1C4 597 aa24.39■■□□□ 1.49
VARS-221ENST00000463184 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.39■■□□□ 1.49
VARS-221ENST00000463184 PNMA3Q9UL41 463 aa24.39■■□□□ 1.49
VARS-221ENST00000463184 PTPRFP10586 1907 aa24.38■■□□□ 1.49
VARS-221ENST00000463184 SGPL1O95470 568 aa24.38■■□□□ 1.49
VARS-221ENST00000463184 GNAI2P04899 355 aa24.38■■□□□ 1.49
VARS-221ENST00000463184 G3BP1Q13283 466 aaKnown RBP eCLIP24.38■■□□□ 1.498e-6■■■■□ 20.2
VARS-221ENST00000463184 TBC1D9Q6ZT07 1266 aa24.38■■□□□ 1.49
VARS-221ENST00000463184 RAI14Q9P0K7 980 aa24.38■■□□□ 1.49
VARS-221ENST00000463184 PHIPQ8WWQ0 1821 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms