RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 HTR3BO95264 441 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 HCLS1P14317 486 aaPredicted RBP5.34□□□□□ -1.55
GPNMB-205ENST00000463011 SELPP16109 830 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 GUCY2CP25092 1073 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 AP3B2Q13367 1082 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 INPP5AQ14642 412 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 TCEA2Q15560 299 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 PLEKHG6Q3KR16 790 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 WIPI1Q5MNZ9 446 aaPredicted RBP5.34□□□□□ -1.55
GPNMB-205ENST00000463011 SCARA3Q6AZY7 606 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 MRM1Q6IN84 353 aaKnown RBP5.34□□□□□ -1.55
GPNMB-205ENST00000463011 CRIPAKQ8N1N5 446 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 VWA5B2Q8N398 1253 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 JMYQ8N9B5 988 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 ST13P5Q8NFI4 369 aaPredicted RBP5.34□□□□□ -1.55
GPNMB-205ENST00000463011 GPBAR1Q8TDU6 330 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 SLC7A3Q8WY07 619 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 TM9SF2Q99805 663 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 TMX1Q9H3N1 280 aa5.34□□□□□ -1.55
GPNMB-205ENST00000463011 DDX56Q9NY93 547 aaKnown RBP5.34□□□□□ -1.55
GPNMB-205ENST00000463011 FAM86C2PA6NEL3 165 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 GFRA2O00451 464 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 NRG2O14511 850 aaPredicted RBP5.33□□□□□ -1.56
GPNMB-205ENST00000463011 PARNO95453 639 aaKnown RBP5.33□□□□□ -1.56
GPNMB-205ENST00000463011 ECEL1O95672 775 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 FAM153BP0C7A2 387 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 ADH7P40394 386 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 SUZ12Q15022 739 aaKnown RBP5.33□□□□□ -1.56
GPNMB-205ENST00000463011 ZYXQ15942 572 aaKnown RBP5.33□□□□□ -1.56
GPNMB-205ENST00000463011 PSAPL1Q6NUJ1 521 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 LRFN4Q6PJG9 635 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 VHLLQ6RSH7 139 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 STAG1Q8WVM7 1258 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 TMEM40Q8WWA1 233 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 TNFRSF25Q93038 417 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 PLPPR2Q96GM1 343 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 AAASQ9NRG9 546 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 KLF15Q9UIH9 416 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 PCDHB10Q9UN67 800 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 CD2APQ9Y5K6 639 aa5.33□□□□□ -1.56
GPNMB-205ENST00000463011 PRR36Q9H6K5 1346 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 LTBP3Q9NS15 1303 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 SLC22A31A6NKX4 558 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 MEIS3P2A8K0S8 358 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 UPK3BL1B0FP48 263 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 UPK3BL2E5RIL1 263 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 H3BRJ5 948 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 PLCG1P19174 1290 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 MLECQ14165 292 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 DALRD3Q5D0E6 543 aaKnown RBP5.32□□□□□ -1.56
GPNMB-205ENST00000463011 TXNDC11Q6PKC3 985 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 UNC5AQ6ZN44 842 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 EEPD1Q7L9B9 569 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 NUDT8Q8WV74 236 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 ATG4CQ96DT6 458 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 CORO1BQ9BR76 489 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 IRF2BPLQ9H1B7 796 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 CACNA2D2Q9NY47 1150 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 REV1Q9UBZ9 1251 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 STK17AQ9UEE5 414 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 G3BP2Q9UN86 482 aaKnown RBP5.32□□□□□ -1.56
GPNMB-205ENST00000463011 SNCAIPQ9Y6H5 919 aa5.32□□□□□ -1.56
GPNMB-205ENST00000463011 RGS9O75916 674 aaPredicted RBP5.31□□□□□ -1.56
GPNMB-205ENST00000463011 CYP11A1P05108 521 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 ACRP10323 421 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 NME1P15531 152 aaKnown RBP5.31□□□□□ -1.56
GPNMB-205ENST00000463011 MAOBP27338 520 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 NCAPHQ15003 741 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 POU4F3Q15319 338 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
GPNMB-205ENST00000463011 OVOS1Q6IE37 1185 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 SV2AQ7L0J3 742 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 HDXQ7Z353 690 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 DHX37Q8IY37 1157 aaKnown RBP5.31□□□□□ -1.56
GPNMB-205ENST00000463011 IL22RA1Q8N6P7 574 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 ZSWIM2Q8NEG5 633 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 ELMO3Q96BJ8 720 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 SLC9A7Q96T83 725 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 SPATA9Q9BWV2 254 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 CCDC86Q9H6F5 360 aaKnown RBP5.31□□□□□ -1.56
GPNMB-205ENST00000463011 FRRS1LQ9P0K9 344 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
GPNMB-205ENST00000463011 ARID4BQ4LE39 1312 aaPredicted RBP5.3□□□□□ -1.56
GPNMB-205ENST00000463011 ADARB2-AS1A8MUL3 147 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 DCDC2CA8MYV0 355 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 LINC01387J3KSC0 135 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 DNAJA2O60884 412 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 PPFIA3O75145 1194 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 LIG1P18858 919 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 ADH6P28332 368 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 ARL4DP49703 201 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 EVA1CP58658 441 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 C19orf57Q0VDD7 668 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 INTS3Q68E01 1043 aaKnown RBP5.3□□□□□ -1.56
GPNMB-205ENST00000463011 KIAA1211LQ6NV74 962 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 TREML4Q6UXN2 200 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 NLRC3Q7RTR2 1065 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 SYNPOQ8N3V7 929 aa5.3□□□□□ -1.56
GPNMB-205ENST00000463011 TAB3Q8N5C8 712 aaPredicted RBP5.3□□□□□ -1.56
GPNMB-205ENST00000463011 TTC9Q92623 222 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms