RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SPHKAPQ2M3C7 1700 aa10.24□□□□□ -0.77
UBE4B-204ENST00000462658 A0A0A0MRY4 1105 aa10.24□□□□□ -0.77
UBE4B-204ENST00000462658 FAM177BA6PVY3 158 aa10.24□□□□□ -0.77
UBE4B-204ENST00000462658 ZNF16P17020 682 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-204ENST00000462658 GNA15P30679 374 aa10.24□□□□□ -0.77
UBE4B-204ENST00000462658 ZNF326Q5BKZ1 582 aaKnown RBP10.24□□□□□ -0.77
UBE4B-204ENST00000462658 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
UBE4B-204ENST00000462658 VN1R5Q7Z5H4 357 aa10.24□□□□□ -0.77
UBE4B-204ENST00000462658 ZNF142P52746 1687 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-204ENST00000462658 ZC3H13Q5T200 1668 aaKnown RBP10.24□□□□□ -0.77
UBE4B-204ENST00000462658 CAMSAP1Q5T5Y3 1602 aa10.23□□□□□ -0.77
UBE4B-204ENST00000462658 PIK3R2O00459 728 aa10.23□□□□□ -0.77
UBE4B-204ENST00000462658 XPCQ01831 940 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-204ENST00000462658 HGSNATQ68CP4 663 aa10.23□□□□□ -0.77
UBE4B-204ENST00000462658 CACTIN-AS1Q8N1I8 211 aa10.23□□□□□ -0.77
UBE4B-204ENST00000462658 C12orf49Q9H741 205 aa10.23□□□□□ -0.77
UBE4B-204ENST00000462658 NOS1P29475 1434 aa10.23□□□□□ -0.77
UBE4B-204ENST00000462658 SPATA31E1Q6ZUB1 1445 aa10.23□□□□□ -0.77
UBE4B-204ENST00000462658 DEAF1O75398 565 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-204ENST00000462658 DAB2P98082 770 aa10.22□□□□□ -0.77
UBE4B-204ENST00000462658 FGD1P98174 961 aa10.22□□□□□ -0.77
UBE4B-204ENST00000462658 PSMD2Q13200 908 aa10.22□□□□□ -0.77
UBE4B-204ENST00000462658 CARD10Q9BWT7 1032 aa10.22□□□□□ -0.77
UBE4B-204ENST00000462658 UHRF1BP1Q6BDS2 1440 aa10.22□□□□□ -0.77
UBE4B-204ENST00000462658 CLTCL1P53675 1640 aa10.22□□□□□ -0.77
UBE4B-204ENST00000462658 CFAP65Q6ZU64 1925 aaKnown RBP10.21□□□□□ -0.77
UBE4B-204ENST00000462658 H3BRJ5 948 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 CABP4P57796 275 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 TRIM28Q13263 835 aaKnown RBP10.21□□□□□ -0.77
UBE4B-204ENST00000462658 SETDB1Q15047 1291 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 DTHD1Q6ZMT9 781 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 SLC7A3Q8WY07 619 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 ZNF576Q9H609 170 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 SLC52A1Q9NWF4 448 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 PPP4R2Q9NY27 417 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 NOP53Q9NZM5 478 aaKnown RBP10.21□□□□□ -0.77
UBE4B-204ENST00000462658 AK5Q9Y6K8 562 aa10.21□□□□□ -0.77
UBE4B-204ENST00000462658 SOX1O00570 391 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-204ENST00000462658 ITPKAP23677 461 aa10.2□□□□□ -0.78
UBE4B-204ENST00000462658 FMR1NBQ8N0W7 255 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-204ENST00000462658 GALNT11Q8NCW6 608 aa10.2□□□□□ -0.78
UBE4B-204ENST00000462658 UGGT1Q9NYU2 1555 aa10.2□□□□□ -0.78
UBE4B-204ENST00000462658 AKAP2Q9Y2D5 859 aa10.2□□□□□ -0.78
UBE4B-204ENST00000462658 CEP170BQ9Y4F5 1589 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-204ENST00000462658 RBM47A0AV96 593 aaKnown RBP10.19□□□□□ -0.78
UBE4B-204ENST00000462658 SPDYE3A6NKU9 549 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 GIPC1O14908 333 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 FSCN2O14926 492 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 USP17L7P0C7H9 530 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 EIF4BP23588 611 aaKnown RBP10.19□□□□□ -0.78
UBE4B-204ENST00000462658 RAC1P63000 192 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 PCDH1Q08174 1060 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 IDI1Q13907 227 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 IKBKEQ14164 716 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 ZNF423Q2M1K9 1284 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 TMC4Q7Z404 712 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 C3orf58Q8NDZ4 430 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 FRMD6Q96NE9 622 aa10.19□□□□□ -0.78
UBE4B-204ENST00000462658 CLEC4MQ9H2X3 399 aaPredicted RBP10.19□□□□□ -0.78
UBE4B-204ENST00000462658 SPATA31D1Q6ZQQ2 1576 aa10.18□□□□□ -0.78
UBE4B-204ENST00000462658 NEURL4Q96JN8 1562 aa10.18□□□□□ -0.78
UBE4B-204ENST00000462658 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
UBE4B-204ENST00000462658 HSPA5P11021 654 aaKnown RBP10.18□□□□□ -0.78
UBE4B-204ENST00000462658 ESRRAP11474 423 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-204ENST00000462658 ZNF157P51786 506 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-204ENST00000462658 GRIK4Q16099 956 aa10.18□□□□□ -0.78
UBE4B-204ENST00000462658 PRRT3Q5FWE3 981 aa10.18□□□□□ -0.78
UBE4B-204ENST00000462658 FAM117BQ6P1L5 589 aa10.18□□□□□ -0.78
UBE4B-204ENST00000462658 HIRIP3Q9BW71 556 aaPredicted RBP10.18□□□□□ -0.78
UBE4B-204ENST00000462658 ERVK-7P63135 1459 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 RPGRIP1LQ68CZ1 1315 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 GSTT1P30711 240 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 FAAP100Q0VG06 881 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 FBXO11Q86XK2 927 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 DTWD1Q8N5C7 304 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 ZNF428Q96B54 188 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 KLHDC7BQ96G42 594 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 SRCIN1Q9C0H9 1055 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 FAM8A1Q9UBU6 413 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 SYNMO15061 1565 aa10.17□□□□□ -0.78
UBE4B-204ENST00000462658 RNF225M0QZC1 329 aaPredicted RBP10.16□□□□□ -0.78
UBE4B-204ENST00000462658 TM4SF5O14894 197 aa10.16□□□□□ -0.78
UBE4B-204ENST00000462658 PTPN12Q05209 780 aaKnown RBP10.16□□□□□ -0.78
UBE4B-204ENST00000462658 DIEXFQ68CQ4 756 aaKnown RBP10.16□□□□□ -0.78
UBE4B-204ENST00000462658 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
UBE4B-204ENST00000462658 CARD11Q9BXL7 1154 aa10.16□□□□□ -0.78
UBE4B-204ENST00000462658 MRS2Q9HD23 443 aa10.16□□□□□ -0.78
UBE4B-204ENST00000462658 SEC31BQ9NQW1 1179 aa10.16□□□□□ -0.78
UBE4B-204ENST00000462658 KCNK4Q9NYG8 393 aa10.16□□□□□ -0.78
UBE4B-204ENST00000462658 RALGAPBQ86X10 1494 aa10.16□□□□□ -0.78
UBE4B-204ENST00000462658 KIF1BO60333 1816 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 DDX3YO15523 660 aaKnown RBP10.15□□□□□ -0.78
UBE4B-204ENST00000462658 SORBS3O60504 671 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 FBXO24O75426 580 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 SPATA31C1P0DKV0 1188 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 GSK3AP49840 483 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 PIP4K2BP78356 416 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 VTI1BQ9UEU0 232 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 ADGRB3O60242 1522 aa10.15□□□□□ -0.78
UBE4B-204ENST00000462658 A2ML1A8K2U0 1454 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms