RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 FOXO4P98177 505 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 FKBP4Q02790 459 aaKnown RBP eCLIP6.52□□□□□ -1.37
PDCD4-204ENST00000462577 RABL6Q3YEC7 729 aaPredicted RBP6.52□□□□□ -1.37
PDCD4-204ENST00000462577 SLC4A10Q6U841 1118 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 ADAM32Q8TC27 787 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 ITPKCQ96DU7 683 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 KAZALD1Q96I82 304 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 RTFDC1Q9BY42 306 aaPredicted RBP6.52□□□□□ -1.37
PDCD4-204ENST00000462577 USP44Q9H0E7 712 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 VPS33BQ9H267 617 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 ZFAND3Q9H8U3 227 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 C9orf78Q9NZ63 289 aaPredicted RBP6.52□□□□□ -1.37
PDCD4-204ENST00000462577 HDAC5Q9UQL6 1122 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 GPSM3Q9Y4H4 160 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 MYH2Q9UKX2 1941 aa6.52□□□□□ -1.37
PDCD4-204ENST00000462577 UTRNP46939 3433 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 NBPF7P0C2Y1 421 aaPredicted RBP6.51□□□□□ -1.37
PDCD4-204ENST00000462577 SNRPBP14678 240 aaKnown RBP6.51□□□□□ -1.37
PDCD4-204ENST00000462577 LMNB1P20700 586 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 PRELPP51888 382 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 ARHGAP27Q6ZUM4 889 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 MTMR14Q8NCE2 650 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 CELF1Q92879 486 aaKnown RBP6.51□□□□□ -1.37
PDCD4-204ENST00000462577 SLC10A4Q96EP9 437 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 CDC5LQ99459 802 aaKnown RBP6.51□□□□□ -1.37
PDCD4-204ENST00000462577 TAOK3Q9H2K8 898 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 GREM2Q9H772 168 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 PODXL2Q9NZ53 605 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 RCAN3Q9UKA8 241 aa6.51□□□□□ -1.37
PDCD4-204ENST00000462577 GNAI3P08754 354 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 RPS8P62241 208 aaKnown RBP6.5□□□□□ -1.37
PDCD4-204ENST00000462577 ANKRD18AQ8IVF6 992 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 DZIP1LQ8IYY4 767 aaKnown RBP6.5□□□□□ -1.37
PDCD4-204ENST00000462577 ANKRD44Q8N8A2 993 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 SUPT20HQ8NEM7 779 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 JARID2Q92833 1246 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-204ENST00000462577 SUCLG2Q96I99 432 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 TRIM47Q96LD4 638 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 KCTD15Q96SI1 283 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-204ENST00000462577 SENP2Q9HC62 589 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 WWC3Q9ULE0 1092 aa6.5□□□□□ -1.37
PDCD4-204ENST00000462577 MYH8P13535 1937 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 MED23Q9ULK4 1368 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 ANKRD18BA2A2Z9 1011 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 ITGA6P23229 1130 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 IARSP41252 1262 aaKnown RBP6.49□□□□□ -1.37
PDCD4-204ENST00000462577 RASSF7Q02833 373 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 MTX1Q13505 466 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 PDE3AQ14432 1141 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 EPHA10Q5JZY3 1008 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 LMBR1LQ6UX01 489 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 CCDC116Q8IYX3 515 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 TMEM57Q8N5G2 664 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 FRAT1Q92837 279 aaPredicted RBP6.49□□□□□ -1.37
PDCD4-204ENST00000462577 ZFP42Q96MM3 310 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 TMX4Q9H1E5 349 aaPredicted RBP6.49□□□□□ -1.37
PDCD4-204ENST00000462577 SEC31BQ9NQW1 1179 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 BSDC1Q9NW68 430 aaPredicted RBP6.49□□□□□ -1.37
PDCD4-204ENST00000462577 TNNQ9UQP3 1299 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 XDHP47989 1333 aa6.49□□□□□ -1.37
PDCD4-204ENST00000462577 UBTFL1P0CB47 393 aaPredicted RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 RLBP1P12271 317 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 YY1P25490 414 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 IGHMBP2P38935 993 aaKnown RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 KIAA2012Q0VF49 1180 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 IFIT5Q13325 482 aaKnown RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 PPP1R26Q5T8A7 1209 aaPredicted RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 C9orf131Q5VYM1 1079 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 MRPL14Q6P1L8 145 aaKnown RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 OLFM4Q6UX06 510 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 DPP8Q6V1X1 898 aaPredicted RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 FTSJ3Q8IY81 847 aaKnown RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 KIFC2Q96AC6 838 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 MEIS3Q99687 375 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 ANKRD2Q9GZV1 360 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 BICC1Q9H694 974 aaKnown RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 RNF181Q9P0P0 153 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 CDV3Q9UKY7 258 aaKnown RBP6.48□□□□□ -1.37
PDCD4-204ENST00000462577 IRS2Q9Y4H2 1338 aa6.48□□□□□ -1.37
PDCD4-204ENST00000462577 PAPPA2Q9BXP8 1791 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 ZBBXA8MT70 800 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 FZD9O00144 591 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 ZBTB7BO15156 539 aaPredicted RBP6.47□□□□□ -1.37
PDCD4-204ENST00000462577 GPR37L1O60883 481 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 FBXO45P0C2W1 286 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 RFX5P48382 616 aaPredicted RBP6.47□□□□□ -1.37
PDCD4-204ENST00000462577 GPSM2P81274 684 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 CCDC57Q2TAC2 916 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 C15orf52Q6ZUT6 534 aaKnown RBP6.47□□□□□ -1.37
PDCD4-204ENST00000462577 TBC1D16Q8TBP0 767 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 PURBQ96QR8 312 aaKnown RBP6.47□□□□□ -1.37
PDCD4-204ENST00000462577 CHMP4BQ9H444 224 aaKnown RBP6.47□□□□□ -1.37
PDCD4-204ENST00000462577 DDX19BQ9UMR2 479 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 MINPP1Q9UNW1 487 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 LRRFIP2Q9Y608 721 aaKnown RBP6.47□□□□□ -1.37
PDCD4-204ENST00000462577 ATAD5Q96QE3 1844 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 MROH5Q6ZUA9 1318 aa6.47□□□□□ -1.37
PDCD4-204ENST00000462577 CIAO1O76071 339 aa6.46□□□□□ -1.38
PDCD4-204ENST00000462577 GNAI2P04899 355 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms