RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PLEKHM2Q8IWE5 1019 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 CCDC146Q8IYE0 955 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 LINC00116Q8NCU8 138 aa7.53□□□□□ -1.2
VPS36-202ENST00000462289 SYTL4Q96C24 671 aaPredicted RBP7.53□□□□□ -1.2
VPS36-202ENST00000462289 CCNL1Q9UK58 526 aaPredicted RBP7.53□□□□□ -1.2
VPS36-202ENST00000462289 PNPLA7Q6ZV29 1317 aa7.52□□□□□ -1.2
VPS36-202ENST00000462289 KIAA1551Q9HCM1 1747 aa7.52□□□□□ -1.2
VPS36-202ENST00000462289 NEURL1BA8MQ27 555 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 PIK3R2O00459 728 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 GNB5O14775 395 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 KHNYNO15037 678 aaKnown RBP7.52□□□□□ -1.21
VPS36-202ENST00000462289 KCNQ3O43525 872 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 CD33P20138 364 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 TXLNAP40222 546 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 EIF4A1P60842 406 aaKnown RBP7.52□□□□□ -1.21
VPS36-202ENST00000462289 SLC39A6Q13433 755 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 RTF1Q92541 710 aaKnown RBP7.52□□□□□ -1.21
VPS36-202ENST00000462289 THUMPD2Q9BTF0 503 aaKnown RBP7.52□□□□□ -1.21
VPS36-202ENST00000462289 RRAGCQ9HB90 399 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 IFT57Q9NWB7 429 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 GPC6Q9Y625 555 aaPredicted RBP7.52□□□□□ -1.21
VPS36-202ENST00000462289 NUP98P52948 1817 aa7.52□□□□□ -1.21
VPS36-202ENST00000462289 AFDNP55196 1824 aaKnown RBP7.51□□□□□ -1.21
VPS36-202ENST00000462289 POM121CA8CG34 1229 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 RAD21O60216 631 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 NEFMP07197 916 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 HOXB7P09629 217 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 AMPD1P23109 780 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 SSFA2P28290 1259 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 NOS2P35228 1153 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 ZNF468Q5VIY5 522 aaPredicted RBP7.51□□□□□ -1.21
VPS36-202ENST00000462289 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 TRIM50Q86XT4 487 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 WDR63Q8IWG1 891 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 TRMT2AQ8IZ69 625 aaKnown RBP7.51□□□□□ -1.21
VPS36-202ENST00000462289 DEPDC4Q8N2C3 294 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 BRCA1P38398 1863 aaKnown RBP7.51□□□□□ -1.21
VPS36-202ENST00000462289 ANKRD36CQ5JPF3 1778 aa7.51□□□□□ -1.21
VPS36-202ENST00000462289 SOS1Q07889 1333 aaPredicted RBP7.51□□□□□ -1.21
VPS36-202ENST00000462289 BTBD11A6QL63 1104 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
VPS36-202ENST00000462289 ADAM23O75077 832 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 RPS6KA4O75676 772 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 CRKLP46109 303 aaKnown RBP7.5□□□□□ -1.21
VPS36-202ENST00000462289 EIF5P55010 431 aaKnown RBP7.5□□□□□ -1.21
VPS36-202ENST00000462289 KCNQ4P56696 695 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 CHSY3Q70JA7 882 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 SLC9A9Q8IVB4 645 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 DNAJC10Q8IXB1 793 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 FMNL2Q96PY5 1086 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
VPS36-202ENST00000462289 PDGFDQ9GZP0 370 aaPredicted RBP7.5□□□□□ -1.21
VPS36-202ENST00000462289 SUV39H2Q9H5I1 410 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 MARK1Q9P0L2 795 aa7.5□□□□□ -1.21
VPS36-202ENST00000462289 RRP7AQ9Y3A4 280 aaKnown RBP7.5□□□□□ -1.21
VPS36-202ENST00000462289 N4BP2Q86UW6 1770 aaPredicted RBP7.49□□□□□ -1.21
VPS36-202ENST00000462289 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 M0R2N6 131 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 PTCD1O75127 700 aaKnown RBP7.49□□□□□ -1.21
VPS36-202ENST00000462289 SNRPA1P09661 255 aaKnown RBP7.49□□□□□ -1.21
VPS36-202ENST00000462289 CLDN10P78369 228 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 BICDL1Q6ZP65 573 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 COL23A1Q86Y22 540 aaPredicted RBP7.49□□□□□ -1.21
VPS36-202ENST00000462289 FLAD1Q8NFF5 587 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 MDFIQ99750 246 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 KIAA1024Q9UPX6 916 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 GJA3Q9Y6H8 435 aa7.49□□□□□ -1.21
VPS36-202ENST00000462289 DLEC1Q9Y238 1755 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 PRAMEF22A3QJZ6 481 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 ATP9BO43861 1147 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 IL6STP40189 918 aaPredicted RBP7.48□□□□□ -1.21
VPS36-202ENST00000462289 ATP1A2P50993 1020 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 HIRAP54198 1017 aaPredicted RBP7.48□□□□□ -1.21
VPS36-202ENST00000462289 GNAI1P63096 354 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
VPS36-202ENST00000462289 R3HDM1Q15032 1099 aaKnown RBP7.48□□□□□ -1.21
VPS36-202ENST00000462289 TNS4Q8IZW8 715 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 TTC5Q8N0Z6 440 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 CCDC87Q9NVE4 849 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 STK32BQ9NY57 414 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 NOP53Q9NZM5 478 aaKnown RBP7.48□□□□□ -1.21
VPS36-202ENST00000462289 USP16Q9Y5T5 823 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 ARFGEF2Q9Y6D5 1785 aa7.48□□□□□ -1.21
VPS36-202ENST00000462289 COL15A1P39059 1388 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 ANKRD31Q8N7Z5 1873 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 STARD3NLO95772 234 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 GRIN2CQ14957 1233 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 CCDC102BQ68D86 513 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 SIX5Q8N196 739 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 TPCN2Q8NHX9 752 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 MTFR1LQ9H019 292 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 MIS18AQ9NYP9 233 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 ZBTB1Q9Y2K1 713 aa7.47□□□□□ -1.21
VPS36-202ENST00000462289 UTRNP46939 3433 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms