RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 NFIAQ12857 509 aa19.23■□□□□ 0.67
APP-211ENST00000462267 CCDC27Q2M243 656 aa19.23■□□□□ 0.67
APP-211ENST00000462267 METTL24Q5JXM2 366 aa19.23■□□□□ 0.67
APP-211ENST00000462267 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
APP-211ENST00000462267 OGDHLQ9ULD0 1010 aa19.23■□□□□ 0.67
APP-211ENST00000462267 DAGLAQ9Y4D2 1042 aa19.23■□□□□ 0.67
APP-211ENST00000462267 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
APP-211ENST00000462267 PDE8BO95263 885 aa19.22■□□□□ 0.67
APP-211ENST00000462267 FAM110CQ1W6H9 321 aa19.22■□□□□ 0.67
APP-211ENST00000462267 WDR66Q8TBY9 1149 aa19.22■□□□□ 0.67
APP-211ENST00000462267 GUCD1Q96NT3 240 aa19.22■□□□□ 0.67
APP-211ENST00000462267 FAM198AQ9UFP1 575 aa19.22■□□□□ 0.67
APP-211ENST00000462267 DOCK3Q8IZD9 2030 aa19.21■□□□□ 0.67
APP-211ENST00000462267 VGLL2Q8N8G2 317 aa19.21■□□□□ 0.67
APP-211ENST00000462267 PRDM6Q9NQX0 595 aa19.21■□□□□ 0.67
APP-211ENST00000462267 PNMA3Q9UL41 463 aa19.21■□□□□ 0.67
APP-211ENST00000462267 AGTPBP1Q9UPW5 1226 aa19.21■□□□□ 0.67
APP-211ENST00000462267 AK9Q5TCS8 1911 aa19.21■□□□□ 0.67
APP-211ENST00000462267 IL16Q14005 1332 aa19.21■□□□□ 0.67
APP-211ENST00000462267 ATRNL1Q5VV63 1379 aa19.2■□□□□ 0.66
APP-211ENST00000462267 VAMP4O75379 141 aa19.2■□□□□ 0.66
APP-211ENST00000462267 ALDH1L1O75891 902 aa19.2■□□□□ 0.66
APP-211ENST00000462267 LRRC24Q50LG9 513 aa19.2■□□□□ 0.66
APP-211ENST00000462267 WWC1Q8IX03 1113 aa19.2■□□□□ 0.66
APP-211ENST00000462267 VCANP13611 3396 aa19.2■□□□□ 0.66
APP-211ENST00000462267 IFIT1P09914 478 aaKnown RBP19.19■□□□□ 0.66
APP-211ENST00000462267 DDX10Q13206 875 aaKnown RBP19.19■□□□□ 0.66
APP-211ENST00000462267 KAZALD1Q96I82 304 aa19.19■□□□□ 0.66
APP-211ENST00000462267 SUCLG2Q96I99 432 aa19.19■□□□□ 0.66
APP-211ENST00000462267 USP40Q9NVE5 1235 aa19.19■□□□□ 0.66
APP-211ENST00000462267 GJD2Q9UKL4 321 aa19.19■□□□□ 0.66
APP-211ENST00000462267 LRRFIP2Q9Y608 721 aaKnown RBP19.19■□□□□ 0.66
APP-211ENST00000462267 DDX60LQ5H9U9 1706 aaKnown RBP19.18■□□□□ 0.66
APP-211ENST00000462267 TRIM75PA6NK02 468 aa19.18■□□□□ 0.66
APP-211ENST00000462267 CTNND1O60716 968 aaKnown RBP19.18■□□□□ 0.66
APP-211ENST00000462267 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
APP-211ENST00000462267 GCLCP48506 637 aaPredicted RBP19.18■□□□□ 0.66
APP-211ENST00000462267 MAP3K10Q02779 954 aa19.18■□□□□ 0.66
APP-211ENST00000462267 DIXDC1Q155Q3 683 aa19.18■□□□□ 0.66
APP-211ENST00000462267 ZFPM1Q8IX07 1006 aa19.18■□□□□ 0.66
APP-211ENST00000462267 PFASO15067 1338 aa19.18■□□□□ 0.66
APP-211ENST00000462267 ENTPD3O75355 529 aa19.17■□□□□ 0.66
APP-211ENST00000462267 TRIM32Q13049 653 aa19.17■□□□□ 0.66
APP-211ENST00000462267 PUM3Q15397 648 aaKnown RBP19.17■□□□□ 0.66
APP-211ENST00000462267 SRCIN1Q9C0H9 1055 aa19.17■□□□□ 0.66
APP-211ENST00000462267 COL6A1P12109 1028 aa19.16■□□□□ 0.66
APP-211ENST00000462267 FGFR2P21802 821 aa19.16■□□□□ 0.66
APP-211ENST00000462267 MDM2Q00987 491 aaPredicted RBP19.16■□□□□ 0.66
APP-211ENST00000462267 RABL6Q3YEC7 729 aaPredicted RBP19.16■□□□□ 0.66
APP-211ENST00000462267 PROCA1Q8NCQ7 364 aaPredicted RBP19.16■□□□□ 0.66
APP-211ENST00000462267 IDI2Q9BXS1 227 aa19.16■□□□□ 0.66
APP-211ENST00000462267 COL2A1P02458 1487 aaPredicted RBP19.16■□□□□ 0.66
APP-211ENST00000462267 TREML2Q5T2D2 321 aa19.15■□□□□ 0.66
APP-211ENST00000462267 MAP3K21Q5TCX8 1036 aa19.15■□□□□ 0.66
APP-211ENST00000462267 PRKRIP1Q9H875 184 aaPredicted RBP19.15■□□□□ 0.66
APP-211ENST00000462267 SPINK5Q9NQ38 1064 aaPredicted RBP19.15■□□□□ 0.66
APP-211ENST00000462267 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
APP-211ENST00000462267 PTPRFP10586 1907 aa19.14■□□□□ 0.65
APP-211ENST00000462267 LDHBP07195 334 aaKnown RBP19.14■□□□□ 0.65
APP-211ENST00000462267 NBPF7P0C2Y1 421 aaPredicted RBP19.14■□□□□ 0.65
APP-211ENST00000462267 PRDX5P30044 214 aa19.14■□□□□ 0.65
APP-211ENST00000462267 RGS3P49796 1198 aa19.14■□□□□ 0.65
APP-211ENST00000462267 ZNF697Q5TEC3 545 aa19.14■□□□□ 0.65
APP-211ENST00000462267 ZSCAN29Q8IWY8 852 aaPredicted RBP19.14■□□□□ 0.65
APP-211ENST00000462267 TRIB2Q92519 343 aa19.14■□□□□ 0.65
APP-211ENST00000462267 FAM161BQ96MY7 647 aa19.14■□□□□ 0.65
APP-211ENST00000462267 BICC1Q9H694 974 aaKnown RBP19.14■□□□□ 0.65
APP-211ENST00000462267 TTC28Q96AY4 2481 aa19.14■□□□□ 0.65
APP-211ENST00000462267 PRKAR2AP13861 404 aaKnown RBP19.13■□□□□ 0.65
APP-211ENST00000462267 PABPC4Q13310 644 aaKnown RBP eCLIP19.13■□□□□ 0.65
APP-211ENST00000462267 SLC4A10Q6U841 1118 aa19.13■□□□□ 0.65
APP-211ENST00000462267 UTYO14607 1347 aa19.13■□□□□ 0.65
APP-211ENST00000462267 LAMA2P24043 3122 aaKnown RBP19.12■□□□□ 0.65
APP-211ENST00000462267 XRCC5P13010 732 aaKnown RBP19.12■□□□□ 0.65
APP-211ENST00000462267 SLC5A1P13866 664 aa19.12■□□□□ 0.65
APP-211ENST00000462267 LRRC26Q2I0M4 334 aa19.12■□□□□ 0.65
APP-211ENST00000462267 SH3BP5LQ7L8J4 393 aa19.12■□□□□ 0.65
APP-211ENST00000462267 LPIN2Q92539 896 aa19.12■□□□□ 0.65
APP-211ENST00000462267 LBHD1Q9BQE6 289 aaPredicted RBP19.12■□□□□ 0.65
APP-211ENST00000462267 SPTBN5Q9NRC6 3674 aaKnown RBP19.12■□□□□ 0.65
APP-211ENST00000462267 DOCK2Q92608 1830 aa19.11■□□□□ 0.65
APP-211ENST00000462267 NCBP3Q53F19 620 aaKnown RBP19.11■□□□□ 0.65
APP-211ENST00000462267 TRMT44Q8IYL2 757 aaKnown RBP19.11■□□□□ 0.65
APP-211ENST00000462267 ANKRD44Q8N8A2 993 aa19.11■□□□□ 0.65
APP-211ENST00000462267 MAFAQ8NHW3 353 aaPredicted RBP19.11■□□□□ 0.65
APP-211ENST00000462267 SYMPKQ92797 1274 aaKnown RBP19.11■□□□□ 0.65
APP-211ENST00000462267 CDX2Q99626 313 aaPredicted RBP19.11■□□□□ 0.65
APP-211ENST00000462267 DOCK1Q14185 1865 aa19.1■□□□□ 0.65
APP-211ENST00000462267 SALL1Q9NSC2 1324 aa19.1■□□□□ 0.65
APP-211ENST00000462267 PHIPQ8WWQ0 1821 aa19.1■□□□□ 0.65
APP-211ENST00000462267 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
APP-211ENST00000462267 CYP2B6P20813 491 aa19.1■□□□□ 0.65
APP-211ENST00000462267 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
APP-211ENST00000462267 CCDC84Q86UT8 332 aaPredicted RBP19.1■□□□□ 0.65
APP-211ENST00000462267 TBC1D2Q9BYX2 928 aa19.1■□□□□ 0.65
APP-211ENST00000462267 ASCC2Q9H1I8 757 aaPredicted RBP19.1■□□□□ 0.65
APP-211ENST00000462267 MORF4L1Q9UBU8 362 aa19.1■□□□□ 0.65
APP-211ENST00000462267 RFX7Q2KHR2 1363 aa19.09■□□□□ 0.65
APP-211ENST00000462267 TBC1D12O60347 775 aa19.09■□□□□ 0.65
APP-211ENST00000462267 SPP2Q13103 211 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms