RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983	TNFAIP1	Q13829	316 aa		18.34	■□□□□ 0.53
C1S-209	ENST00000461983	BLOC1S2	Q6QNY1	142 aa		18.34	■□□□□ 0.53
C1S-209	ENST00000461983	MFSD6	Q6ZSS7	791 aa		18.34	■□□□□ 0.53
C1S-209	ENST00000461983	RALYL	Q86SE5	291 aa	Known RBP	18.34	■□□□□ 0.53
C1S-209	ENST00000461983	MICALL2	Q8IY33	904 aa		18.34	■□□□□ 0.53
C1S-209	ENST00000461983	NCOA7	Q8NI08	942 aa		18.34	■□□□□ 0.53
C1S-209	ENST00000461983	NEK1	Q96PY6	1258 aa		18.34	■□□□□ 0.53
C1S-209	ENST00000461983	DAXX	Q9UER7	740 aa	Predicted RBP	18.34	■□□□□ 0.53
C1S-209	ENST00000461983	MYH2	Q9UKX2	1941 aa		18.33	■□□□□ 0.53
C1S-209	ENST00000461983	ZNF541	Q9H0D2	1346 aa		18.33	■□□□□ 0.53
C1S-209	ENST00000461983	MINDY4B	A8MYZ0	360 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	USP17L12	C9JPN9	530 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	USP17L21	D6R901	530 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	HLA-DOA	P06340	250 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	PPARA	Q07869	468 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	ANKRD1	Q15327	319 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	AKNAD1	Q5T1N1	836 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	CTR9	Q6PD62	1173 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	JAKMIP1	Q96N16	626 aa	Known RBP	18.33	■□□□□ 0.52
C1S-209	ENST00000461983	MTA3	Q9BTC8	594 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	ZSWIM6	Q9HCJ5	1215 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.33	■□□□□ 0.52
C1S-209	ENST00000461983	GPRC5D	Q9NZD1	345 aa		18.33	■□□□□ 0.52
C1S-209	ENST00000461983	MKRN1	Q9UHC7	482 aa	Known RBP	18.33	■□□□□ 0.52
C1S-209	ENST00000461983	DICER1	Q9UPY3	1922 aa	Known RBP	18.33	■□□□□ 0.52
C1S-209	ENST00000461983	FLT1	P17948	1338 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983	WDR19	Q8NEZ3	1342 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983		E7EWF7	191 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983	C12orf60	Q5U649	245 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983	RUFY3	Q7L099	469 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983	RASEF	Q8IZ41	740 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983	STAG1	Q8WVM7	1258 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983	PRMT6	Q96LA8	375 aa	Predicted RBP	18.32	■□□□□ 0.52
C1S-209	ENST00000461983	PALD1	Q9ULE6	856 aa		18.32	■□□□□ 0.52
C1S-209	ENST00000461983	IQCA1L	A6NCM1	817 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	WDHD1	O75717	1129 aa	Predicted RBP	18.31	■□□□□ 0.52
C1S-209	ENST00000461983	CAST	P20810	708 aa	Known RBP	18.31	■□□□□ 0.52
C1S-209	ENST00000461983	MCM5	P33992	734 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	NEK4	P51957	841 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	SPDYE2	Q495Y8	402 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	DHX32	Q7L7V1	743 aa	Known RBP	18.31	■□□□□ 0.52
C1S-209	ENST00000461983	FAM83A	Q86UY5	434 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	MAPKAPK5	Q8IW41	473 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	SNX21	Q969T3	373 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	CHMP4C	Q96CF2	233 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	HOOK2	Q96ED9	719 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	ZBED3	Q96IU2	234 aa	Predicted RBP	18.31	■□□□□ 0.52
C1S-209	ENST00000461983	KIF2C	Q99661	725 aa		18.31	■□□□□ 0.52
C1S-209	ENST00000461983	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.31	■□□□□ 0.52
C1S-209	ENST00000461983	GLTPD2	A6NH11	291 aa		18.3	■□□□□ 0.52
C1S-209	ENST00000461983	SART3	Q15020	963 aa	Known RBP	18.3	■□□□□ 0.52
C1S-209	ENST00000461983	CCDC178	Q5BJE1	867 aa		18.3	■□□□□ 0.52
C1S-209	ENST00000461983	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.3	■□□□□ 0.52
C1S-209	ENST00000461983	ESR2	Q92731	530 aa		18.3	■□□□□ 0.52
C1S-209	ENST00000461983	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.3	■□□□□ 0.52
C1S-209	ENST00000461983	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.3	■□□□□ 0.52
C1S-209	ENST00000461983	TDRD3	Q9H7E2	651 aa	Known RBP	18.3	■□□□□ 0.52
C1S-209	ENST00000461983	ADARB2	Q9NS39	739 aa	Known RBP	18.3	■□□□□ 0.52
C1S-209	ENST00000461983	ZNF70	Q9UC06	446 aa	Predicted RBP	18.3	■□□□□ 0.52
C1S-209	ENST00000461983	SWAP70	Q9UH65	585 aa		18.3	■□□□□ 0.52
C1S-209	ENST00000461983	COL2A1	P02458	1487 aa	Predicted RBP	18.29	■□□□□ 0.52
C1S-209	ENST00000461983	WNT10B	O00744	389 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	HAND2	P61296	217 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	PICALM	Q13492	652 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	KIF4B	Q2VIQ3	1234 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	HSCB	Q8IWL3	235 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	FAM151A	Q8WW52	585 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	TRIM34	Q9BYJ4	488 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	EHD4	Q9H223	541 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	PI4KB	Q9UBF8	816 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	SBF1	O95248	1867 aa		18.29	■□□□□ 0.52
C1S-209	ENST00000461983	ZNF646	O15015	1829 aa	Predicted RBP	18.28	■□□□□ 0.52
C1S-209	ENST00000461983	ORC4	O43929	436 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	FGR	P09769	529 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	RPS6KB1	P23443	525 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	FGD1	P98174	961 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	PPP4R3B	Q5MIZ7	849 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	APOBEC3F	Q8IUX4	373 aa	Known RBP	18.28	■□□□□ 0.52
C1S-209	ENST00000461983	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.28	■□□□□ 0.52
C1S-209	ENST00000461983	MKNK2	Q9HBH9	465 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	PDRG1	Q9NUG6	133 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	ROBO3	Q96MS0	1386 aa		18.28	■□□□□ 0.52
C1S-209	ENST00000461983	DDN	O94850	711 aa	Predicted RBP	18.27	■□□□□ 0.52
C1S-209	ENST00000461983	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.27	■□□□□ 0.52
C1S-209	ENST00000461983	TMTC2	Q8N394	836 aa		18.27	■□□□□ 0.52
C1S-209	ENST00000461983	FBXL16	Q8N461	479 aa		18.27	■□□□□ 0.52
C1S-209	ENST00000461983	TOMM22	Q9NS69	142 aa		18.27	■□□□□ 0.52
C1S-209	ENST00000461983	SERPINB13	Q9UIV8	391 aa		18.27	■□□□□ 0.52
C1S-209	ENST00000461983	HACL1	Q9UJ83	578 aa		18.27	■□□□□ 0.52
C1S-209	ENST00000461983	ERICH2	A1L162	156 aa		18.26	■□□□□ 0.51
C1S-209	ENST00000461983	RBM26	Q5T8P6	1007 aa	Known RBP	18.26	■□□□□ 0.51
C1S-209	ENST00000461983	USP50	Q70EL3	339 aa	Predicted RBP	18.26	■□□□□ 0.51
C1S-209	ENST00000461983	PNMA8A	Q86V59	439 aa	Predicted RBP	18.26	■□□□□ 0.51
C1S-209	ENST00000461983	IQCA1	Q86XH1	822 aa		18.26	■□□□□ 0.51
C1S-209	ENST00000461983	ZC3H15	Q8WU90	426 aa	Known RBP	18.26	■□□□□ 0.51
C1S-209	ENST00000461983	TMEM87B	Q96K49	555 aa		18.26	■□□□□ 0.51
C1S-209	ENST00000461983	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.26	■□□□□ 0.51
C1S-209	ENST00000461983	VEZT	Q9HBM0	779 aa		18.26	■□□□□ 0.51
C1S-209	ENST00000461983	SAP30BP	Q9UHR5	308 aa	Known RBP	18.26	■□□□□ 0.51
C1S-209	ENST00000461983	PPP2R3B	Q9Y5P8	575 aa		18.26	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms