RNA–Protein interactions for RNA: ENST00000461972.5

FAM228B-202, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 2

Gene FAM228B, Length 2,616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-202ENST00000461972 SLC26A6Q9BXS9 759 aa23.3■■□□□ 1.32
FAM228B-202ENST00000461972 DNAJC25Q9H1X3 360 aa23.3■■□□□ 1.32
FAM228B-202ENST00000461972 CACNA1SQ13698 1873 aa23.3■■□□□ 1.32
FAM228B-202ENST00000461972 CCDC69A6NI79 296 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 PTMAP06454 111 aaKnown RBP23.29■■□□□ 1.32
FAM228B-202ENST00000461972 HIBADHP31937 336 aaKnown RBP23.29■■□□□ 1.32
FAM228B-202ENST00000461972 UVSSAQ2YD98 709 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 FSIP1Q8NA03 581 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 AATFQ9NY61 560 aaKnown RBP eCLIP23.29■■□□□ 1.32
FAM228B-202ENST00000461972 ZNF831Q5JPB2 1677 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 THSD7AQ9UPZ6 1657 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 GNAT2P19087 354 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 RBM43Q6ZSC3 357 aaKnown RBP23.29■■□□□ 1.32
FAM228B-202ENST00000461972 NSUN4Q96CB9 384 aaKnown RBP23.29■■□□□ 1.32
FAM228B-202ENST00000461972 SPATA31A6Q5VVP1 1343 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 BAZ2AQ9UIF9 1905 aaKnown RBP23.29■■□□□ 1.32
FAM228B-202ENST00000461972 ENGASEQ8NFI3 743 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 CBX8Q9HC52 389 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 RTEL1Q9NZ71 1219 aa23.29■■□□□ 1.32
FAM228B-202ENST00000461972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.28■■□□□ 1.32
FAM228B-202ENST00000461972 MSNP26038 577 aaKnown RBP23.28■■□□□ 1.32
FAM228B-202ENST00000461972 IARSP41252 1262 aaKnown RBP23.28■■□□□ 1.32
FAM228B-202ENST00000461972 LIFRP42702 1097 aa23.28■■□□□ 1.32
FAM228B-202ENST00000461972 GRIK5Q16478 980 aa23.28■■□□□ 1.32
FAM228B-202ENST00000461972 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
FAM228B-202ENST00000461972 KRT23Q9C075 422 aa23.28■■□□□ 1.32
FAM228B-202ENST00000461972 CHD4Q14839 1912 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 STK38Q15208 465 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 TNRC6CQ9HCJ0 1690 aaKnown RBP23.27■■□□□ 1.32
FAM228B-202ENST00000461972 hCG_1642624A0A1W2PR95 340 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 CYP2D6P10635 497 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 NDUFA8P51970 172 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 WTAPQ15007 396 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 TTC12Q9H892 705 aaPredicted RBP23.27■■□□□ 1.32
FAM228B-202ENST00000461972 CNNM2Q9H8M5 875 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 KCNJ14Q9UNX9 436 aa23.27■■□□□ 1.32
FAM228B-202ENST00000461972 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.27■■□□□ 1.32
FAM228B-202ENST00000461972 USP17L12C9JPN9 530 aa23.26■■□□□ 1.31
FAM228B-202ENST00000461972 USP17L21D6R901 530 aa23.26■■□□□ 1.31
FAM228B-202ENST00000461972 ZKSCAN5Q9Y2L8 839 aa23.26■■□□□ 1.31
FAM228B-202ENST00000461972 NHSQ6T4R5 1651 aa23.26■■□□□ 1.31
FAM228B-202ENST00000461972 FAM200AQ8TCP9 573 aa23.26■■□□□ 1.31
FAM228B-202ENST00000461972 ANKIB1Q9P2G1 1089 aa23.26■■□□□ 1.31
FAM228B-202ENST00000461972 NMT2O60551 498 aa23.25■■□□□ 1.31
FAM228B-202ENST00000461972 WDHD1O75717 1129 aaPredicted RBP23.25■■□□□ 1.31
FAM228B-202ENST00000461972 HS1BP3Q53T59 392 aa23.25■■□□□ 1.31
FAM228B-202ENST00000461972 CTR9Q6PD62 1173 aa23.25■■□□□ 1.31
FAM228B-202ENST00000461972 SPC24Q8NBT2 197 aa23.25■■□□□ 1.31
FAM228B-202ENST00000461972 CCDC39Q9UFE4 941 aa23.25■■□□□ 1.31
FAM228B-202ENST00000461972 SF3A1Q15459 793 aaKnown RBP23.25■■□□□ 1.31
FAM228B-202ENST00000461972 C11orf57Q6ZUT1 292 aaPredicted RBP23.25■■□□□ 1.31
FAM228B-202ENST00000461972 C17orf53Q8N3J3 647 aaPredicted RBP23.24■■□□□ 1.31
FAM228B-202ENST00000461972 CHMP4CQ96CF2 233 aa23.24■■□□□ 1.31
FAM228B-202ENST00000461972 TAF1LQ8IZX4 1826 aa23.24■■□□□ 1.31
FAM228B-202ENST00000461972 TNKSO95271 1327 aa23.24■■□□□ 1.31
FAM228B-202ENST00000461972 MYH13Q9UKX3 1938 aa23.24■■□□□ 1.31
FAM228B-202ENST00000461972 SPTLC2O15270 562 aa23.24■■□□□ 1.31
FAM228B-202ENST00000461972 SASS6Q6UVJ0 657 aa23.24■■□□□ 1.31
FAM228B-202ENST00000461972 IRS2Q9Y4H2 1338 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 ANO1Q5XXA6 986 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 SYNE3Q6ZMZ3 975 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 CCDC73Q6ZRK6 1079 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 FMR1NBQ8N0W7 255 aaPredicted RBP23.23■■□□□ 1.31
FAM228B-202ENST00000461972 CNBD1Q8NA66 436 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 MYH2Q9UKX2 1941 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 FAM160A1Q05DH4 1040 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 PRR5LQ6MZQ0 368 aa23.23■■□□□ 1.31
FAM228B-202ENST00000461972 SSRP1Q08945 709 aaKnown RBP23.22■■□□□ 1.31
FAM228B-202ENST00000461972 SEC23AQ15436 765 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 RTN1Q16799 776 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 FAM47AQ5JRC9 791 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 NBPF11Q86T75 865 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 ZNF654Q8IZM8 581 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 ENAHQ8N8S7 591 aaPredicted RBP23.22■■□□□ 1.31
FAM228B-202ENST00000461972 SHISA4Q96DD7 197 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 UBAC1Q9BSL1 405 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 POLR3EQ9NVU0 708 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 BTBD18B2RXH4 712 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 TRIM37O94972 964 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 ZNF165P49910 485 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 ATL3Q6DD88 541 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 ADALQ6DHV7 355 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 NAP1L5Q96NT1 182 aaPredicted RBP23.22■■□□□ 1.31
FAM228B-202ENST00000461972 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 COL24A1Q17RW2 1714 aa23.22■■□□□ 1.31
FAM228B-202ENST00000461972 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 ONECUT3O60422 494 aaPredicted RBP23.21■■□□□ 1.31
FAM228B-202ENST00000461972 CDKL5O76039 1030 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 AXDND1Q5T1B0 1012 aaPredicted RBP23.21■■□□□ 1.31
FAM228B-202ENST00000461972 BRAPQ7Z569 592 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 MRPS27Q92552 414 aaKnown RBP23.21■■□□□ 1.31
FAM228B-202ENST00000461972 CLIC6Q96NY7 704 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 QTRT2Q9H974 415 aaKnown RBP23.21■■□□□ 1.31
FAM228B-202ENST00000461972 TIAM2Q8IVF5 1701 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 DIXDC1Q155Q3 683 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 CPLX2Q6PUV4 134 aaKnown RBP23.21■■□□□ 1.31
FAM228B-202ENST00000461972 FANCBQ8NB91 859 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 MROH7-TTC4A0A0A0MT08 1334 aa23.21■■□□□ 1.31
FAM228B-202ENST00000461972 KINO60870 393 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms