RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ARID4AP29374 1257 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-207ENST00000461798 MAP3K10Q02779 954 aa11.3□□□□□ -0.6
BRCA1-207ENST00000461798 MLLT1Q03111 559 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-207ENST00000461798 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-207ENST00000461798 WRNIP1Q96S55 665 aa11.3□□□□□ -0.6
BRCA1-207ENST00000461798 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
BRCA1-207ENST00000461798 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-207ENST00000461798 ABCF2Q9UG63 623 aa11.3□□□□□ -0.6
BRCA1-207ENST00000461798 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 CCL15-CCL14A0A0B4J2E2 113 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 IGSF3O75054 1194 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 UQCRFS1P1P0C7P4 283 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 PPATQ06203 517 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 TCP10Q12799 353 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 CRHR2Q13324 411 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 PPIL2Q13356 520 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 CCL15Q16663 113 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 MIGA2Q7L4E1 593 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 ZFPM1Q8IX07 1006 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
BRCA1-207ENST00000461798 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 ZKSCAN4Q969J2 545 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-207ENST00000461798 ZNF512BQ96KM6 892 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-207ENST00000461798 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
BRCA1-207ENST00000461798 LAMB1P07942 1786 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 IRF6O14896 467 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 WDHD1O75717 1129 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-207ENST00000461798 LDHCP07864 332 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 CETPP11597 493 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 INPP5BP32019 993 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 RGS3P49796 1198 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 MECOMQ03112 1051 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 SNAPC2Q13487 334 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
BRCA1-207ENST00000461798 DZIP1Q86YF9 867 aaKnown RBP11.28□□□□□ -0.6
BRCA1-207ENST00000461798 NSUN4Q96CB9 384 aaKnown RBP11.28□□□□□ -0.6
BRCA1-207ENST00000461798 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 ZFYVE28Q9HCC9 887 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 MROH7-TTC4A0A0A0MT08 1334 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 ATRNL1Q5VV63 1379 aa11.28□□□□□ -0.6
BRCA1-207ENST00000461798 PHF20L1A8MW92 1017 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 SURF6O75683 361 aaKnown RBP11.27□□□□□ -0.61
BRCA1-207ENST00000461798 MS4A1P11836 297 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 MCAMP43121 646 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 BTDP43251 543 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 RHBDL3P58872 404 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 GSTO1P78417 241 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 SP3Q02447 781 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 SH3BP5LQ7L8J4 393 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 ITPRIPQ8IWB1 547 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-207ENST00000461798 KCNH4Q9UQ05 1017 aa11.27□□□□□ -0.61
BRCA1-207ENST00000461798 CXCL11O14625 94 aa11.26□□□□□ -0.61
BRCA1-207ENST00000461798 TBC1D12O60347 775 aa11.26□□□□□ -0.61
BRCA1-207ENST00000461798 TAF1CQ15572 869 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-207ENST00000461798 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
BRCA1-207ENST00000461798 PI16Q6UXB8 463 aa11.26□□□□□ -0.61
BRCA1-207ENST00000461798 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
BRCA1-207ENST00000461798 KIF12Q96FN5 646 aa11.26□□□□□ -0.61
BRCA1-207ENST00000461798 C1orf115Q9H7X2 142 aa11.26□□□□□ -0.61
BRCA1-207ENST00000461798 DDX4Q9NQI0 724 aaKnown RBP11.26□□□□□ -0.61
BRCA1-207ENST00000461798 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-207ENST00000461798 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-207ENST00000461798 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 BTBD19C9JJ37 291 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 TLR2O60603 784 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 PPP4CP60510 307 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 OS9Q13438 667 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-207ENST00000461798 MOGSQ13724 837 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 CEP85Q6P2H3 762 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 ANKRD23Q86SG2 305 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 CD99L2Q8TCZ2 262 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 DBNDD2Q9BQY9 259 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 PTPN22Q9Y2R2 807 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 TRIM17Q9Y577 477 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 OTOFQ9HC10 1997 aa11.25□□□□□ -0.61
BRCA1-207ENST00000461798 CTNND1O60716 968 aaKnown RBP11.24□□□□□ -0.61
BRCA1-207ENST00000461798 CAP1Q01518 475 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 TTC39AQ5SRH9 613 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 SCYL3Q8IZE3 742 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-207ENST00000461798 PANK1Q8TE04 598 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 EAF2Q96CJ1 260 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-207ENST00000461798 EFCC1Q9HA90 598 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 LRP2BPQ9P2M1 347 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 DBNLQ9UJU6 430 aaKnown RBP11.24□□□□□ -0.61
BRCA1-207ENST00000461798 MYH13Q9UKX3 1938 aa11.24□□□□□ -0.61
BRCA1-207ENST00000461798 ST18O60284 1047 aa11.23□□□□□ -0.61
BRCA1-207ENST00000461798 CYP2E1P05181 493 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms