RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 SCYL3Q8IZE3 742 aa16.05■□□□□ 0.16
C9orf78-202ENST00000461349 HMX1Q9NP08 348 aaPredicted RBP16.05■□□□□ 0.16
C9orf78-202ENST00000461349 F6X3S4 739 aa16.04■□□□□ 0.16
C9orf78-202ENST00000461349 METTL24Q5JXM2 366 aa16.04■□□□□ 0.16
C9orf78-202ENST00000461349 ANKRD13CQ8N6S4 541 aa16.03■□□□□ 0.16
C9orf78-202ENST00000461349 PNMA3Q9UL41 463 aa16.03■□□□□ 0.16
C9orf78-202ENST00000461349 MYH2Q9UKX2 1941 aa16.03■□□□□ 0.16
C9orf78-202ENST00000461349 PTPRAP18433 802 aa16.02■□□□□ 0.16
C9orf78-202ENST00000461349 FAM110CQ1W6H9 321 aa16.02■□□□□ 0.16
C9orf78-202ENST00000461349 CDC42EP5Q6NZY7 148 aa16.02■□□□□ 0.16
C9orf78-202ENST00000461349 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
C9orf78-202ENST00000461349 DAGLAQ9Y4D2 1042 aa16.02■□□□□ 0.16
C9orf78-202ENST00000461349 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
C9orf78-202ENST00000461349 LRRFIP2Q9Y608 721 aaKnown RBP16.02■□□□□ 0.16
C9orf78-202ENST00000461349 ATAD5Q96QE3 1844 aa16.01■□□□□ 0.15
C9orf78-202ENST00000461349 LOC285556D6RIA3 1793 aa16.01■□□□□ 0.15
C9orf78-202ENST00000461349 PDE8BO95263 885 aa16.01■□□□□ 0.15
C9orf78-202ENST00000461349 NFIAQ12857 509 aa16.01■□□□□ 0.15
C9orf78-202ENST00000461349 FAM109BQ6ICB4 259 aaPredicted RBP16.01■□□□□ 0.15
C9orf78-202ENST00000461349 AGTPBP1Q9UPW5 1226 aa16.01■□□□□ 0.15
C9orf78-202ENST00000461349 PLXNB2O15031 1838 aa16.01■□□□□ 0.15
C9orf78-202ENST00000461349 VCANP13611 3396 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 KIF16BQ96L93 1317 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 TRIM75PA6NK02 468 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 ALDH1L1O75891 902 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 IFIT1P09914 478 aaKnown RBP16■□□□□ 0.15
C9orf78-202ENST00000461349 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
C9orf78-202ENST00000461349 GUCD1Q96NT3 240 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 PRDM6Q9NQX0 595 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 USP40Q9NVE5 1235 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 FAM198AQ9UFP1 575 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 OGDHLQ9ULD0 1010 aa16■□□□□ 0.15
C9orf78-202ENST00000461349 FRMPD3Q5JV73 1810 aa15.99■□□□□ 0.15
C9orf78-202ENST00000461349 PHF20L1A8MW92 1017 aa15.99■□□□□ 0.15
C9orf78-202ENST00000461349 DIXDC1Q155Q3 683 aa15.99■□□□□ 0.15
C9orf78-202ENST00000461349 CCDC27Q2M243 656 aa15.99■□□□□ 0.15
C9orf78-202ENST00000461349 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
C9orf78-202ENST00000461349 ZSCAN29Q8IWY8 852 aaPredicted RBP15.99■□□□□ 0.15
C9orf78-202ENST00000461349 FAM161BQ96MY7 647 aa15.99■□□□□ 0.15
C9orf78-202ENST00000461349 IL16Q14005 1332 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 GCLCP48506 637 aaPredicted RBP15.98■□□□□ 0.15
C9orf78-202ENST00000461349 MDM2Q00987 491 aaPredicted RBP15.98■□□□□ 0.15
C9orf78-202ENST00000461349 PUM3Q15397 648 aaKnown RBP15.98■□□□□ 0.15
C9orf78-202ENST00000461349 ZNF697Q5TEC3 545 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 SLC4A10Q6U841 1118 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 WWC1Q8IX03 1113 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 VGLL2Q8N8G2 317 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 SUCLG2Q96I99 432 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 SRCIN1Q9C0H9 1055 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 ATRNL1Q5VV63 1379 aa15.98■□□□□ 0.15
C9orf78-202ENST00000461349 PFASO15067 1338 aa15.97■□□□□ 0.15
C9orf78-202ENST00000461349 CTNND1O60716 968 aaKnown RBP15.97■□□□□ 0.15
C9orf78-202ENST00000461349 VAMP4O75379 141 aa15.97■□□□□ 0.15
C9orf78-202ENST00000461349 TRIM32Q13049 653 aa15.97■□□□□ 0.15
C9orf78-202ENST00000461349 PABPC4Q13310 644 aaKnown RBP eCLIP15.97■□□□□ 0.15
C9orf78-202ENST00000461349 PROCA1Q8NCQ7 364 aaPredicted RBP15.97■□□□□ 0.15
C9orf78-202ENST00000461349 MAST2Q6P0Q8 1798 aa15.97■□□□□ 0.15
C9orf78-202ENST00000461349 COL2A1P02458 1487 aaPredicted RBP15.97■□□□□ 0.15
C9orf78-202ENST00000461349 FANCIQ9NVI1 1328 aa15.96■□□□□ 0.15
C9orf78-202ENST00000461349 ENTPD3O75355 529 aa15.96■□□□□ 0.15
C9orf78-202ENST00000461349 LDHBP07195 334 aaKnown RBP15.96■□□□□ 0.15
C9orf78-202ENST00000461349 RGS3P49796 1198 aa15.96■□□□□ 0.15
C9orf78-202ENST00000461349 TREML2Q5T2D2 321 aa15.96■□□□□ 0.15
C9orf78-202ENST00000461349 ZFPM1Q8IX07 1006 aa15.96■□□□□ 0.15
C9orf78-202ENST00000461349 LBHD1Q9BQE6 289 aaPredicted RBP15.96■□□□□ 0.15
C9orf78-202ENST00000461349 BICC1Q9H694 974 aaKnown RBP15.96■□□□□ 0.15
C9orf78-202ENST00000461349 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
C9orf78-202ENST00000461349 EYSQ5T1H1 3165 aa15.95■□□□□ 0.14
C9orf78-202ENST00000461349 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
C9orf78-202ENST00000461349 SLC5A1P13866 664 aa15.95■□□□□ 0.14
C9orf78-202ENST00000461349 PRDX5P30044 214 aa15.95■□□□□ 0.14
C9orf78-202ENST00000461349 TRIB2Q92519 343 aa15.95■□□□□ 0.14
C9orf78-202ENST00000461349 KAZALD1Q96I82 304 aa15.95■□□□□ 0.14
C9orf78-202ENST00000461349 GJD2Q9UKL4 321 aa15.95■□□□□ 0.14
C9orf78-202ENST00000461349 NBPF7P0C2Y1 421 aaPredicted RBP15.94■□□□□ 0.14
C9orf78-202ENST00000461349 MAFAQ8NHW3 353 aaPredicted RBP15.94■□□□□ 0.14
C9orf78-202ENST00000461349 SYMPKQ92797 1274 aaKnown RBP15.94■□□□□ 0.14
C9orf78-202ENST00000461349 IDI2Q9BXS1 227 aa15.94■□□□□ 0.14
C9orf78-202ENST00000461349 PRKRIP1Q9H875 184 aaPredicted RBP15.94■□□□□ 0.14
C9orf78-202ENST00000461349 LAMA2P24043 3122 aaKnown RBP15.94■□□□□ 0.14
C9orf78-202ENST00000461349 SPTBN5Q9NRC6 3674 aaKnown RBP15.93■□□□□ 0.14
C9orf78-202ENST00000461349 COL6A1P12109 1028 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 CYP2B6P20813 491 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 FGFR2P21802 821 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 MAP3K10Q02779 954 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 LRRC26Q2I0M4 334 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 RABL6Q3YEC7 729 aaPredicted RBP15.93■□□□□ 0.14
C9orf78-202ENST00000461349 MAP3K21Q5TCX8 1036 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 TRMT44Q8IYL2 757 aaKnown RBP15.93■□□□□ 0.14
C9orf78-202ENST00000461349 LPIN2Q92539 896 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 GNL3LQ9NVN8 582 aaKnown RBP15.93■□□□□ 0.14
C9orf78-202ENST00000461349 LTBP2Q14767 1821 aa15.93■□□□□ 0.14
C9orf78-202ENST00000461349 EXOSC9Q06265 439 aaKnown RBP15.92■□□□□ 0.14
C9orf78-202ENST00000461349 CCDC84Q86UT8 332 aaPredicted RBP15.92■□□□□ 0.14
C9orf78-202ENST00000461349 SOCS4Q8WXH5 440 aa15.92■□□□□ 0.14
C9orf78-202ENST00000461349 CDX2Q99626 313 aaPredicted RBP15.92■□□□□ 0.14
C9orf78-202ENST00000461349 NUDT12Q9BQG2 462 aa15.92■□□□□ 0.14
C9orf78-202ENST00000461349 TBC1D2Q9BYX2 928 aa15.92■□□□□ 0.14
C9orf78-202ENST00000461349 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms