RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 REM2Q8IYK8 340 aaPredicted RBP19.65■□□□□ 0.74
SHANK1-205ENST00000461154 KBTBD3Q8NAB2 608 aa19.65■□□□□ 0.74
SHANK1-205ENST00000461154 FAM151AQ8WW52 585 aa19.65■□□□□ 0.74
SHANK1-205ENST00000461154 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
SHANK1-205ENST00000461154 RPAP1Q9BWH6 1393 aaPredicted RBP19.65■□□□□ 0.74
SHANK1-205ENST00000461154 FOXN1O15353 648 aa19.64■□□□□ 0.73
SHANK1-205ENST00000461154 ENTPD3O75355 529 aa19.64■□□□□ 0.73
SHANK1-205ENST00000461154 USP2O75604 605 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-205ENST00000461154 KIF23Q02241 960 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-205ENST00000461154 NFIAQ12857 509 aa19.64■□□□□ 0.73
SHANK1-205ENST00000461154 CENPQQ7L2Z9 268 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-205ENST00000461154 TEX11Q8IYF3 940 aa19.64■□□□□ 0.73
SHANK1-205ENST00000461154 ZNF532Q9HCE3 1301 aa19.64■□□□□ 0.73
SHANK1-205ENST00000461154 THSD7BQ9C0I4 1608 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 SSC5DA1L4H1 1573 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 RFX7Q2KHR2 1363 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 CA12O43570 354 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
SHANK1-205ENST00000461154 WDHD1O75717 1129 aaPredicted RBP19.63■□□□□ 0.73
SHANK1-205ENST00000461154 ADD2P35612 726 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 CTCFP49711 727 aaPredicted RBP19.63■□□□□ 0.73
SHANK1-205ENST00000461154 RGS3P49796 1198 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 TCP10Q12799 353 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 UBE3CQ15386 1083 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 PLEKHM2Q8IWE5 1019 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 SH3RF3Q8TEJ3 882 aaPredicted RBP19.63■□□□□ 0.73
SHANK1-205ENST00000461154 SLC10A4Q96EP9 437 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 ZIC5Q96T25 663 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 OSBPL3Q9H4L5 887 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 FAM198AQ9UFP1 575 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 FZD1Q9UP38 647 aa19.63■□□□□ 0.73
SHANK1-205ENST00000461154 MAGEB6P1A0A0J9YX57 407 aa19.62■□□□□ 0.73
SHANK1-205ENST00000461154 TCRBV5S4A2TA0A5A2 114 aa19.62■□□□□ 0.73
SHANK1-205ENST00000461154 ZFYP08048 801 aaPredicted RBP19.62■□□□□ 0.73
SHANK1-205ENST00000461154 CDAN1Q8IWY9 1227 aa19.62■□□□□ 0.73
SHANK1-205ENST00000461154 ANKRD13AQ8IZ07 590 aa19.62■□□□□ 0.73
SHANK1-205ENST00000461154 MIGA1Q8NAN2 632 aa19.62■□□□□ 0.73
SHANK1-205ENST00000461154 PICALMQ13492 652 aa19.61■□□□□ 0.73
SHANK1-205ENST00000461154 DCAF15Q66K64 600 aa19.61■□□□□ 0.73
SHANK1-205ENST00000461154 EVI5LQ96CN4 794 aa19.61■□□□□ 0.73
SHANK1-205ENST00000461154 FSD1Q9BTV5 496 aa19.61■□□□□ 0.73
SHANK1-205ENST00000461154 DYNLL1P63167 89 aaKnown RBP19.6■□□□□ 0.73
SHANK1-205ENST00000461154 ZSCAN29Q8IWY8 852 aaPredicted RBP19.6■□□□□ 0.73
SHANK1-205ENST00000461154 DDX4Q9NQI0 724 aaKnown RBP19.6■□□□□ 0.73
SHANK1-205ENST00000461154 AK9Q5TCS8 1911 aa19.6■□□□□ 0.73
SHANK1-205ENST00000461154 MAP3K9P80192 1104 aa19.59■□□□□ 0.73
SHANK1-205ENST00000461154 SPRYD7Q5W111 196 aa19.59■□□□□ 0.73
SHANK1-205ENST00000461154 TICAM2Q86XR7 235 aa19.59■□□□□ 0.73
SHANK1-205ENST00000461154 TGFBRAP1Q8WUH2 860 aa19.59■□□□□ 0.73
SHANK1-205ENST00000461154 CSRNP1Q96S65 589 aa19.59■□□□□ 0.73
SHANK1-205ENST00000461154 RIOK1Q9BRS2 568 aaKnown RBP19.59■□□□□ 0.73
SHANK1-205ENST00000461154 FOCADQ5VW36 1801 aa19.59■□□□□ 0.73
SHANK1-205ENST00000461154 COL2A1P02458 1487 aaPredicted RBP19.59■□□□□ 0.73
SHANK1-205ENST00000461154 CDK5RAP2Q96SN8 1893 aa19.58■□□□□ 0.73
SHANK1-205ENST00000461154 TRIM6-TRIM34B2RNG4 842 aa19.58■□□□□ 0.72
SHANK1-205ENST00000461154 RNF113AO15541 343 aaKnown RBP19.58■□□□□ 0.72
SHANK1-205ENST00000461154 PDE4AP27815 886 aa19.58■□□□□ 0.72
SHANK1-205ENST00000461154 USP5P45974 858 aa19.58■□□□□ 0.72
SHANK1-205ENST00000461154 CLMNQ96JQ2 1002 aa19.58■□□□□ 0.72
SHANK1-205ENST00000461154 CRNKL1Q9BZJ0 848 aaKnown RBP19.58■□□□□ 0.72
SHANK1-205ENST00000461154 OSBPL5Q9H0X9 879 aaPredicted RBP19.58■□□□□ 0.72
SHANK1-205ENST00000461154 PRDM10Q9NQV6 1147 aa19.58■□□□□ 0.72
SHANK1-205ENST00000461154 ATRNL1Q5VV63 1379 aa19.57■□□□□ 0.72
SHANK1-205ENST00000461154 FLT1P17948 1338 aa19.57■□□□□ 0.72
SHANK1-205ENST00000461154 ZBTB48P10074 688 aaPredicted RBP19.57■□□□□ 0.72
SHANK1-205ENST00000461154 HSPA8P11142 646 aaKnown RBP19.57■□□□□ 0.72
SHANK1-205ENST00000461154 ZFPM1Q8IX07 1006 aa19.57■□□□□ 0.72
SHANK1-205ENST00000461154 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.57■□□□□ 0.72
SHANK1-205ENST00000461154 APPBP2Q92624 585 aa19.57■□□□□ 0.72
SHANK1-205ENST00000461154 ZNF341Q9BYN7 854 aa19.57■□□□□ 0.72
SHANK1-205ENST00000461154 DHX36Q9H2U1 1008 aaKnown RBP19.57■□□□□ 0.72
SHANK1-205ENST00000461154 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.57■□□□□ 0.72
SHANK1-205ENST00000461154 CSADQ9Y600 493 aa19.57■□□□□ 0.72
SHANK1-205ENST00000461154 MBD4O95243 580 aa19.56■□□□□ 0.72
SHANK1-205ENST00000461154 LBX1P52954 281 aa19.56■□□□□ 0.72
SHANK1-205ENST00000461154 SREBF2Q12772 1141 aa19.56■□□□□ 0.72
SHANK1-205ENST00000461154 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.56■□□□□ 0.72
SHANK1-205ENST00000461154 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
SHANK1-205ENST00000461154 WNK4Q96J92 1243 aa19.56■□□□□ 0.72
SHANK1-205ENST00000461154 SAGE1Q9NXZ1 904 aa19.56■□□□□ 0.72
SHANK1-205ENST00000461154 PPP4R2Q9NY27 417 aa19.56■□□□□ 0.72
SHANK1-205ENST00000461154 MANSC4A6NHS7 340 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-205ENST00000461154 TM4SF4P48230 202 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 INHBEP58166 350 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 MKRN3Q13064 507 aaKnown RBP19.55■□□□□ 0.72
SHANK1-205ENST00000461154 SLFNL1Q499Z3 407 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 MIGA2Q7L4E1 593 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 LCORLQ8N3X6 602 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 RILPL2Q969X0 211 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 ARMT1Q9H993 441 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 ELP3Q9H9T3 547 aa19.55■□□□□ 0.72
SHANK1-205ENST00000461154 DDTLA6NHG4 134 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-205ENST00000461154 VGLL4Q14135 290 aa19.54■□□□□ 0.72
SHANK1-205ENST00000461154 PUS7LQ9H0K6 701 aaKnown RBP19.54■□□□□ 0.72
SHANK1-205ENST00000461154 RNF186Q9NXI6 227 aa19.54■□□□□ 0.72
SHANK1-205ENST00000461154 CHGBP05060 677 aa19.53■□□□□ 0.72
SHANK1-205ENST00000461154 TTC22Q5TAA0 569 aa19.53■□□□□ 0.72
SHANK1-205ENST00000461154 COL13A1Q5TAT6 717 aaPredicted RBP19.53■□□□□ 0.72
SHANK1-205ENST00000461154 SH3BP5LQ7L8J4 393 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms