RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 CCDC102AQ96A19 550 aa22.26■■□□□ 1.15
DDR1-241ENST00000460944 DDX4Q9NQI0 724 aaKnown RBP22.26■■□□□ 1.15
DDR1-241ENST00000460944 FOCADQ5VW36 1801 aa22.26■■□□□ 1.15
DDR1-241ENST00000460944 ADD2P35612 726 aa22.25■■□□□ 1.15
DDR1-241ENST00000460944 PDE1AP54750 535 aa22.25■■□□□ 1.15
DDR1-241ENST00000460944 KBTBD3Q8NAB2 608 aa22.25■■□□□ 1.15
DDR1-241ENST00000460944 STAP2Q9UGK3 403 aa22.25■■□□□ 1.15
DDR1-241ENST00000460944 FZD1Q9UP38 647 aa22.25■■□□□ 1.15
DDR1-241ENST00000460944 MAGEB6P1A0A0J9YX57 407 aa22.24■■□□□ 1.15
DDR1-241ENST00000460944 USP2O75604 605 aaPredicted RBP22.24■■□□□ 1.15
DDR1-241ENST00000460944 DYNLL1P63167 89 aaKnown RBP22.24■■□□□ 1.15
DDR1-241ENST00000460944 LRRFIP1Q32MZ4 808 aaKnown RBP22.24■■□□□ 1.15
DDR1-241ENST00000460944 CSRNP1Q96S65 589 aa22.24■■□□□ 1.15
DDR1-241ENST00000460944 COL2A1P02458 1487 aaPredicted RBP22.23■■□□□ 1.15
DDR1-241ENST00000460944 UNCXA6NJT0 531 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 UBE3CQ15386 1083 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 LDLRAD1Q5T700 205 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 ZFPM1Q8IX07 1006 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 ANKRD13AQ8IZ07 590 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 JMYQ8N9B5 988 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 TGFBRAP1Q8WUH2 860 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 ZNF341Q9BYN7 854 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 OSBPL5Q9H0X9 879 aaPredicted RBP22.23■■□□□ 1.15
DDR1-241ENST00000460944 OTOFQ9HC10 1997 aa22.23■■□□□ 1.15
DDR1-241ENST00000460944 TCRBV5S4A2TA0A5A2 114 aa22.22■■□□□ 1.15
DDR1-241ENST00000460944 SLC10A3P09131 477 aa22.22■■□□□ 1.15
DDR1-241ENST00000460944 USP5P45974 858 aa22.22■■□□□ 1.15
DDR1-241ENST00000460944 NOGQ13253 232 aa22.22■■□□□ 1.15
DDR1-241ENST00000460944 MAPKAPK5Q8IW41 473 aa22.22■■□□□ 1.15
DDR1-241ENST00000460944 THSD7BQ9C0I4 1608 aa22.21■■□□□ 1.15
DDR1-241ENST00000460944 ZFYP08048 801 aaPredicted RBP22.21■■□□□ 1.15
DDR1-241ENST00000460944 RASAL3Q86YV0 1011 aa22.21■■□□□ 1.15
DDR1-241ENST00000460944 RIOK1Q9BRS2 568 aaKnown RBP22.21■■□□□ 1.15
DDR1-241ENST00000460944 FSD1Q9BTV5 496 aa22.21■■□□□ 1.15
DDR1-241ENST00000460944 CRNKL1Q9BZJ0 848 aaKnown RBP22.21■■□□□ 1.15
DDR1-241ENST00000460944 FLT1P17948 1338 aa22.21■■□□□ 1.15
DDR1-241ENST00000460944 MYH1P12882 1939 aa22.21■■□□□ 1.15
DDR1-241ENST00000460944 ATRNL1Q5VV63 1379 aa22.21■■□□□ 1.15
DDR1-241ENST00000460944 DDTLA6NHG4 134 aaPredicted RBP22.2■■□□□ 1.14
DDR1-241ENST00000460944 MAP2K2P36507 400 aa22.2■■□□□ 1.14
DDR1-241ENST00000460944 MIGA2Q7L4E1 593 aa22.2■■□□□ 1.14
DDR1-241ENST00000460944 SH3BP5LQ7L8J4 393 aa22.2■■□□□ 1.14
DDR1-241ENST00000460944 SLC10A4Q96EP9 437 aa22.2■■□□□ 1.14
DDR1-241ENST00000460944 WRNIP1Q96S55 665 aa22.2■■□□□ 1.14
DDR1-241ENST00000460944 DHX36Q9H2U1 1008 aaKnown RBP22.2■■□□□ 1.14
DDR1-241ENST00000460944 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.2■■□□□ 1.14
DDR1-241ENST00000460944 CSADQ9Y600 493 aa22.2■■□□□ 1.14
DDR1-241ENST00000460944 AOC2O75106 756 aa22.19■■□□□ 1.14
DDR1-241ENST00000460944 MAP3K9P80192 1104 aa22.19■■□□□ 1.14
DDR1-241ENST00000460944 PLEKHM2Q8IWE5 1019 aa22.19■■□□□ 1.14
DDR1-241ENST00000460944 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.19■■□□□ 1.14
DDR1-241ENST00000460944 NAV1Q8NEY1 1877 aa22.18■■□□□ 1.14
DDR1-241ENST00000460944 FAM155AB1AL88 458 aaPredicted RBP22.18■■□□□ 1.14
DDR1-241ENST00000460944 RNF113AO15541 343 aaKnown RBP22.18■■□□□ 1.14
DDR1-241ENST00000460944 MBD4O95243 580 aa22.18■■□□□ 1.14
DDR1-241ENST00000460944 AIDAQ96BJ3 306 aa22.18■■□□□ 1.14
DDR1-241ENST00000460944 EVI5LQ96CN4 794 aa22.18■■□□□ 1.14
DDR1-241ENST00000460944 HLA-DOAP06340 250 aa22.17■■□□□ 1.14
DDR1-241ENST00000460944 MAP2K1Q02750 393 aaPredicted RBP22.17■■□□□ 1.14
DDR1-241ENST00000460944 SLFNL1Q499Z3 407 aa22.17■■□□□ 1.14
DDR1-241ENST00000460944 LCORLQ8N3X6 602 aa22.17■■□□□ 1.14
DDR1-241ENST00000460944 APPBP2Q92624 585 aa22.17■■□□□ 1.14
DDR1-241ENST00000460944 CLMNQ96JQ2 1002 aa22.17■■□□□ 1.14
DDR1-241ENST00000460944 OSBPL3Q9H4L5 887 aa22.17■■□□□ 1.14
DDR1-241ENST00000460944 ARMT1Q9H993 441 aa22.17■■□□□ 1.14
DDR1-241ENST00000460944 TRIM34Q9BYJ4 488 aa22.16■■□□□ 1.14
DDR1-241ENST00000460944 ELP3Q9H9T3 547 aa22.16■■□□□ 1.14
DDR1-241ENST00000460944 PI4KBQ9UBF8 816 aa22.16■■□□□ 1.14
DDR1-241ENST00000460944 SAP30BPQ9UHR5 308 aaKnown RBP22.16■■□□□ 1.14
DDR1-241ENST00000460944 TRIM6-TRIM34B2RNG4 842 aa22.15■■□□□ 1.14
DDR1-241ENST00000460944 CHGBP05060 677 aa22.15■■□□□ 1.14
DDR1-241ENST00000460944 VGLL4Q14135 290 aa22.15■■□□□ 1.14
DDR1-241ENST00000460944 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.15■■□□□ 1.14
DDR1-241ENST00000460944 CENPQQ7L2Z9 268 aaPredicted RBP22.15■■□□□ 1.14
DDR1-241ENST00000460944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.15■■□□□ 1.14
DDR1-241ENST00000460944 TBC1D12O60347 775 aa22.14■■□□□ 1.13
DDR1-241ENST00000460944 ZBTB48P10074 688 aaPredicted RBP22.14■■□□□ 1.13
DDR1-241ENST00000460944 KIF23Q02241 960 aaPredicted RBP22.14■■□□□ 1.13
DDR1-241ENST00000460944 MKRN3Q13064 507 aaKnown RBP22.14■■□□□ 1.13
DDR1-241ENST00000460944 SPRYD7Q5W111 196 aa22.14■■□□□ 1.13
DDR1-241ENST00000460944 DDRGK1Q96HY6 314 aa22.14■■□□□ 1.13
DDR1-241ENST00000460944 WNK4Q96J92 1243 aa22.14■■□□□ 1.13
DDR1-241ENST00000460944 BEGAINQ9BUH8 593 aa22.14■■□□□ 1.13
DDR1-241ENST00000460944 PUS7LQ9H0K6 701 aaKnown RBP22.14■■□□□ 1.13
DDR1-241ENST00000460944 HERC5Q9UII4 1024 aaKnown RBP22.14■■□□□ 1.13
DDR1-241ENST00000460944 ZNF112Q9UJU3 913 aa22.14■■□□□ 1.13
DDR1-241ENST00000460944 PALD1Q9ULE6 856 aa22.14■■□□□ 1.13
DDR1-241ENST00000460944 INPP5BP32019 993 aa22.13■■□□□ 1.13
DDR1-241ENST00000460944 TTC6Q86TZ1 520 aa22.13■■□□□ 1.13
DDR1-241ENST00000460944 REM2Q8IYK8 340 aaPredicted RBP22.13■■□□□ 1.13
DDR1-241ENST00000460944 CRACR2BQ8N4Y2 399 aaPredicted RBP22.13■■□□□ 1.13
DDR1-241ENST00000460944 ZKSCAN4Q969J2 545 aaPredicted RBP22.13■■□□□ 1.13
DDR1-241ENST00000460944 RILPL2Q969X0 211 aa22.13■■□□□ 1.13
DDR1-241ENST00000460944 CCDC136Q96JN2 1154 aa22.13■■□□□ 1.13
DDR1-241ENST00000460944 SIPA1L1O43166 1804 aa22.13■■□□□ 1.13
DDR1-241ENST00000460944 DDX60LQ5H9U9 1706 aaKnown RBP22.12■■□□□ 1.13
DDR1-241ENST00000460944 PDE4AP27815 886 aa22.12■■□□□ 1.13
DDR1-241ENST00000460944 MAP3K10Q02779 954 aa22.12■■□□□ 1.13
DDR1-241ENST00000460944 SDR42E1Q8WUS8 393 aa22.12■■□□□ 1.13
DDR1-241ENST00000460944 OPTNQ96CV9 577 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms