RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 ARPP21Q9UBL0 812 aaPredicted RBP20.39■□□□□ 0.86
CDK11A-209ENST00000460465 ZBTB7AO95365 584 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 CTDNEP1O95476 244 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 USP5P45974 858 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 TMEM67Q5HYA8 995 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 SLF2Q8IX21 1173 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 HPS5Q9UPZ3 1129 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 MTMR6Q9Y217 621 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 FOCADQ5VW36 1801 aa20.39■□□□□ 0.85
CDK11A-209ENST00000460465 SCN9AQ15858 1988 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 GPR75-ASB3A0A0A6YYF3 556 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 CERS5Q8N5B7 392 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 LY9Q9HBG7 655 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 SENP2Q9HC62 589 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 ADAMTSL1Q8N6G6 1762 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 GAKO14976 1311 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 VPS37CA5D8V6 355 aaPredicted RBP20.38■□□□□ 0.85
CDK11A-209ENST00000460465 IFIT3O14879 490 aaKnown RBP20.38■□□□□ 0.85
CDK11A-209ENST00000460465 PDCP20941 246 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 EVX2Q03828 476 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 SBK1Q52WX2 424 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 CC2D2BQ6DHV5 1058 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 RAB11FIP4Q86YS3 637 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 DDX11Q96FC9 970 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 FAM163AQ96GL9 167 aaPredicted RBP20.38■□□□□ 0.85
CDK11A-209ENST00000460465 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
CDK11A-209ENST00000460465 SUGT1Q9Y2Z0 365 aa20.38■□□□□ 0.85
CDK11A-209ENST00000460465 DDX60LQ5H9U9 1706 aaKnown RBP20.38■□□□□ 0.85
CDK11A-209ENST00000460465 PTPDC1A2A3K4 754 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 C21orf2O43822 256 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 F13A1P00488 732 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 CYP2D6P10635 497 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 PTMSP20962 102 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 PODNQ7Z5L7 613 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 CERS3Q8IU89 383 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 MXD3Q9BW11 206 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 MCM9Q9NXL9 1143 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 TCHHQ07283 1943 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 TRAK2O60296 914 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 DPEP1P16444 411 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 TTLL6Q8N841 843 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 CHMP4CQ96CF2 233 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 ZKSCAN3Q9BRR0 538 aa20.37■□□□□ 0.85
CDK11A-209ENST00000460465 USP17L8P0C7I0 530 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 TGFBRAP1Q8WUH2 860 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 ESR2Q92731 530 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 F8W031 263 aaPredicted RBP20.36■□□□□ 0.85
CDK11A-209ENST00000460465 ECE2O60344 883 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 FGRP09769 529 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 PCP11498 1178 aaKnown RBP20.36■□□□□ 0.85
CDK11A-209ENST00000460465 PDIA4P13667 645 aaKnown RBP20.36■□□□□ 0.85
CDK11A-209ENST00000460465 KCNA3P22001 575 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 LIFRP42702 1097 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 FOXD4L6Q3SYB3 417 aaPredicted RBP20.36■□□□□ 0.85
CDK11A-209ENST00000460465 APOA5Q6Q788 366 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 FOXD4L3Q6VB84 417 aaPredicted RBP20.36■□□□□ 0.85
CDK11A-209ENST00000460465 NFXL1Q6ZNB6 911 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 SGMS1Q86VZ5 419 aa20.36■□□□□ 0.85
CDK11A-209ENST00000460465 MYH1P12882 1939 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 HMGN5P82970 282 aaKnown RBP20.35■□□□□ 0.85
CDK11A-209ENST00000460465 SART3Q15020 963 aaKnown RBP20.35■□□□□ 0.85
CDK11A-209ENST00000460465 AOC3Q16853 763 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 FAM184AQ8NB25 1140 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 KCNQ5Q9NR82 932 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 ATF5Q9Y2D1 282 aaPredicted RBP20.35■□□□□ 0.85
CDK11A-209ENST00000460465 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDK11A-209ENST00000460465 DAGLAQ9Y4D2 1042 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 PRDM1O75626 825 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 PLCG2P16885 1265 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 SLC4A8Q2Y0W8 1093 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 CDC37L1Q7L3B6 337 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 SUPT20HQ8NEM7 779 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 MTA3Q9BTC8 594 aa20.35■□□□□ 0.85
CDK11A-209ENST00000460465 TTF2Q9UNY4 1162 aaKnown RBP20.35■□□□□ 0.85
CDK11A-209ENST00000460465 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
CDK11A-209ENST00000460465 TEX11Q8IYF3 940 aa20.34■□□□□ 0.85
CDK11A-209ENST00000460465 ERICH2A1L162 156 aa20.33■□□□□ 0.85
CDK11A-209ENST00000460465 RHBDL3P58872 404 aa20.33■□□□□ 0.85
CDK11A-209ENST00000460465 WTAPQ15007 396 aa20.33■□□□□ 0.85
CDK11A-209ENST00000460465 MAPKAPK5Q8IW41 473 aa20.33■□□□□ 0.85
CDK11A-209ENST00000460465 UBAC1Q9BSL1 405 aa20.33■□□□□ 0.85
CDK11A-209ENST00000460465 CCDC69A6NI79 296 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 DHX16O60231 1041 aaKnown RBP20.33■□□□□ 0.84
CDK11A-209ENST00000460465 RANBP6O60518 1105 aaKnown RBP20.33■□□□□ 0.84
CDK11A-209ENST00000460465 PPFIA3O75145 1194 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 RXRAP19793 462 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.84
CDK11A-209ENST00000460465 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 CCDC93Q567U6 631 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 C12orf60Q5U649 245 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 ILDR1Q86SU0 546 aaPredicted RBP20.33■□□□□ 0.84
CDK11A-209ENST00000460465 MTFR1LQ9H019 292 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 LMBRD1Q9NUN5 540 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 ECM29Q5VYK3 1845 aa20.33■□□□□ 0.84
CDK11A-209ENST00000460465 ZBTB43O43298 467 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 ORC4O43929 436 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 PSME4Q14997 1843 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 POLD1P28340 1107 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 R3HDM1Q15032 1099 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms