RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 GNPATO15228 680 aa16.69■□□□□ 0.26
PTPRU-205ENST00000460170 PLCD1P51178 756 aa16.69■□□□□ 0.26
PTPRU-205ENST00000460170 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
PTPRU-205ENST00000460170 ANKRD62A6NC57 917 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 NR1I2O75469 434 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
PTPRU-205ENST00000460170 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 CHD1O14646 1710 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 LRRC24Q50LG9 513 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 TTC38Q5R3I4 469 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 ARAP3Q8WWN8 1544 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 CTSWP56202 376 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 MAATS1Q7Z4T9 603 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 TEX11Q8IYF3 940 aa16.68■□□□□ 0.26
PTPRU-205ENST00000460170 CTNNBL1Q8WYA6 563 aaPredicted RBP16.67■□□□□ 0.26
PTPRU-205ENST00000460170 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
PTPRU-205ENST00000460170 PUF60Q9UHX1 559 aaKnown RBP16.67■□□□□ 0.26
PTPRU-205ENST00000460170 KCNJ14Q9UNX9 436 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 MACROD2A1Z1Q3 448 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 FAM107BQ9H098 131 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 FBXO3Q9UK99 471 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 SPDYE3A6NKU9 549 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 TRERF1Q96PN7 1200 aa16.67■□□□□ 0.26
PTPRU-205ENST00000460170 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-205ENST00000460170 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-205ENST00000460170 TBC1D5Q92609 795 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 CTNND2Q9UQB3 1225 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-205ENST00000460170 PPP1R2P41236 205 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 HSF2BPO75031 334 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 FGAP02671 866 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 TUBBP07437 444 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 POSTNQ15063 836 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 VPS16Q9H269 839 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 GCOM1H8Y6P7 765 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-205ENST00000460170 MYZAPP0CAP1 466 aa16.66■□□□□ 0.26
PTPRU-205ENST00000460170 ZRSR2Q15696 482 aaKnown RBP16.66■□□□□ 0.26
PTPRU-205ENST00000460170 ADCY9O60503 1353 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 UBAP1LF5GYI3 381 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 MICALCLQ6ZW33 695 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 SV2BQ7L1I2 683 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 ARID5AQ03989 594 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 ZMYND15Q9H091 742 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTPRU-205ENST00000460170 OGFRQ9NZT2 677 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 EVCP57679 992 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 CCDC174Q6PII3 467 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 SAP30BPQ9UHR5 308 aaKnown RBP16.65■□□□□ 0.26
PTPRU-205ENST00000460170 SYNRGQ9UMZ2 1314 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 PDE6AP16499 860 aa16.65■□□□□ 0.26
PTPRU-205ENST00000460170 KRT13P13646 458 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-205ENST00000460170 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 TRIM14Q14142 442 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 FERMT2Q96AC1 680 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 SELENOOQ9BVL4 669 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 ARHGAP6O43182 974 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 ADD1P35611 737 aaKnown RBP16.64■□□□□ 0.25
PTPRU-205ENST00000460170 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 PFKFB1P16118 471 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 POLA2Q14181 598 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 CCDC122Q5T0U0 273 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 RIMBP2O15034 1052 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
PTPRU-205ENST00000460170 KIAA0753Q2KHM9 967 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 CAPZA3Q96KX2 299 aa16.64■□□□□ 0.25
PTPRU-205ENST00000460170 GOLGA6L10A0A0M3HER8 536 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 CYP21A2P08686 494 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
PTPRU-205ENST00000460170 PDE4DQ08499 809 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 OGFOD1Q8N543 542 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 XPO4Q9C0E2 1151 aaKnown RBP16.63■□□□□ 0.25
PTPRU-205ENST00000460170 RHOXF2BP0C7M4 288 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 SCRN1Q12765 414 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 RHOXF2Q9BQY4 288 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 MAPK8IP1Q9UQF2 711 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
PTPRU-205ENST00000460170 TFCP2L1Q9NZI6 479 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 ZMYM1Q5SVZ6 1142 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 IFNL3Q8IZI9 196 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 CROCC2H7BZ55 1655 aa16.63■□□□□ 0.25
PTPRU-205ENST00000460170 UFL1O94874 794 aa16.62■□□□□ 0.25
PTPRU-205ENST00000460170 PAK1Q13153 545 aa16.62■□□□□ 0.25
PTPRU-205ENST00000460170 RNF187Q5TA31 235 aaPredicted RBP16.62■□□□□ 0.25
PTPRU-205ENST00000460170 ZNF589Q86UQ0 364 aaPredicted RBP16.62■□□□□ 0.25
PTPRU-205ENST00000460170 UBE2Q2Q8WVN8 375 aa16.62■□□□□ 0.25
PTPRU-205ENST00000460170 HDAC9Q9UKV0 1011 aa16.62■□□□□ 0.25
PTPRU-205ENST00000460170 MADDQ8WXG6 1647 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms