RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 RCAN1P53805 252 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 KIAA2012Q0VF49 1180 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 RRP12Q5JTH9 1297 aaKnown RBP19.39■□□□□ 0.69
CCDC43-202ENST00000457422 SYNE3Q6ZMZ3 975 aa19.39■□□□□ 0.69
CCDC43-202ENST00000457422 RANBP6O60518 1105 aaKnown RBP19.38■□□□□ 0.69
CCDC43-202ENST00000457422 TPM3P06753 285 aa19.38■□□□□ 0.69
CCDC43-202ENST00000457422 SART3Q15020 963 aaKnown RBP19.38■□□□□ 0.69
CCDC43-202ENST00000457422 STX1AQ16623 288 aa19.38■□□□□ 0.69
CCDC43-202ENST00000457422 KRT40Q6A162 431 aa19.38■□□□□ 0.69
CCDC43-202ENST00000457422 FAM84BQ96KN1 310 aaPredicted RBP19.38■□□□□ 0.69
CCDC43-202ENST00000457422 SETDB2Q96T68 719 aa19.38■□□□□ 0.69
CCDC43-202ENST00000457422 DNAJC25Q9H1X3 360 aa19.38■□□□□ 0.69
CCDC43-202ENST00000457422 MAGEB6P1A0A0J9YX57 407 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 IFNAR1P17181 557 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 PPARAQ07869 468 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 ANO1Q5XXA6 986 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 FBXO33Q7Z6M2 555 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 NBPF5PQ86XG9 351 aaPredicted RBP19.37■□□□□ 0.69
CCDC43-202ENST00000457422 VPS37DQ86XT2 251 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 TMTC2Q8N394 836 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 RIOK1Q9BRS2 568 aaKnown RBP19.37■□□□□ 0.69
CCDC43-202ENST00000457422 TOMM22Q9NS69 142 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 CCNL1Q9UK58 526 aaPredicted RBP19.37■□□□□ 0.69
CCDC43-202ENST00000457422 USP21Q9UK80 565 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 ZBTB22O15209 634 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 TERF1P54274 439 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
CCDC43-202ENST00000457422 FAM182BQ5T319 152 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 STK11IPQ8N1F8 1099 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 SDR42E1Q8WUS8 393 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 NLRP3Q96P20 1036 aa19.37■□□□□ 0.69
CCDC43-202ENST00000457422 ZPR1O75312 459 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 FMNL1O95466 1100 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-202ENST00000457422 KLRK1P26718 216 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 RPS8P62241 208 aaKnown RBP19.36■□□□□ 0.69
CCDC43-202ENST00000457422 AMIGO3Q86WK7 504 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 ZNF830Q96NB3 372 aaPredicted RBP19.36■□□□□ 0.69
CCDC43-202ENST00000457422 ZKSCAN3Q9BRR0 538 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 MAST2Q6P0Q8 1798 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 GOLGA6L6A8MZA4 724 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 U2AF2P26368 475 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCDC43-202ENST00000457422 WTAPQ15007 396 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 IQCB1Q15051 598 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 CCDC24Q8N4L8 307 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
CCDC43-202ENST00000457422 DUOX1Q9NRD9 1551 aa19.35■□□□□ 0.69
CCDC43-202ENST00000457422 SSRP1Q08945 709 aaKnown RBP19.35■□□□□ 0.69
CCDC43-202ENST00000457422 SLC39A14Q15043 492 aa19.35■□□□□ 0.69
CCDC43-202ENST00000457422 PLA2G4DQ86XP0 818 aa19.35■□□□□ 0.69
CCDC43-202ENST00000457422 WASF1Q92558 559 aa19.35■□□□□ 0.69
CCDC43-202ENST00000457422 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
CCDC43-202ENST00000457422 ANO8Q9HCE9 1232 aaPredicted RBP19.35■□□□□ 0.69
CCDC43-202ENST00000457422 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
CCDC43-202ENST00000457422 SBF2Q86WG5 1849 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 ERICH2A1L162 156 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 AXDND1Q5T1B0 1012 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-202ENST00000457422 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-202ENST00000457422 ANKRD2Q9GZV1 360 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 TTC12Q9H892 705 aaPredicted RBP19.34■□□□□ 0.69
CCDC43-202ENST00000457422 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
CCDC43-202ENST00000457422 BAZ2AQ9UIF9 1905 aaKnown RBP19.34■□□□□ 0.69
CCDC43-202ENST00000457422 A0A1B0GVL5 298 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 NDUFA8P51970 172 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 DYNLL1P63167 89 aaKnown RBP19.34■□□□□ 0.69
CCDC43-202ENST00000457422 TRIM29Q14134 588 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 TPTE2Q6XPS3 522 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 SLC26A6Q9BXS9 759 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 ANO10Q9NW15 660 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 DLEC1Q9Y238 1755 aa19.34■□□□□ 0.69
CCDC43-202ENST00000457422 SPATA31A6Q5VVP1 1343 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.33■□□□□ 0.69
CCDC43-202ENST00000457422 MINDY4BA8MYZ0 360 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 UBE2Q2LH0YL09 131 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 PPP6R2O75170 966 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 CMA1P23946 247 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 RTN1Q16799 776 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 TMED8Q6PL24 325 aaPredicted RBP19.33■□□□□ 0.69
CCDC43-202ENST00000457422 C11orf57Q6ZUT1 292 aaPredicted RBP19.33■□□□□ 0.69
CCDC43-202ENST00000457422 ZNF384Q8TF68 577 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 ESR2Q92731 530 aa19.33■□□□□ 0.69
CCDC43-202ENST00000457422 KIAA1551Q9HCM1 1747 aa19.33■□□□□ 0.68
CCDC43-202ENST00000457422 CCDC196A0A1B0GTZ2 297 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 TPM2P07951 284 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 PCP11498 1178 aaKnown RBP19.32■□□□□ 0.68
CCDC43-202ENST00000457422 ZNF75DP51815 510 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 CCDC88AQ3V6T2 1871 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
CCDC43-202ENST00000457422 TNRC6CQ9HCJ0 1690 aaKnown RBP19.32■□□□□ 0.68
CCDC43-202ENST00000457422 MYH2Q9UKX2 1941 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 LAMB1P07942 1786 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 SMIM22K7EJ46 135 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 FGRP09769 529 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 PPP2R5BQ15173 497 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 SEC23AQ15436 765 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 SARM1Q6SZW1 724 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 JMYQ8N9B5 988 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 SPC24Q8NBT2 197 aa19.32■□□□□ 0.68
CCDC43-202ENST00000457422 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCDC43-202ENST00000457422 GNL2Q13823 731 aaKnown RBP19.31■□□□□ 0.68
CCDC43-202ENST00000457422 PTPAQ15257 358 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 955.4 ms