RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 DUSP27Q5VZP5 1158 aa20.78■□□□□ 0.92
SF3B4-202ENST00000457312 BADQ92934 168 aa20.78■□□□□ 0.92
SF3B4-202ENST00000457312 HDLBPQ00341 1268 aaKnown RBP20.77■□□□□ 0.92
SF3B4-202ENST00000457312 CACNB2Q08289 660 aaPredicted RBP20.77■□□□□ 0.92
SF3B4-202ENST00000457312 LMOD3Q0VAK6 560 aa20.77■□□□□ 0.92
SF3B4-202ENST00000457312 PDE3AQ14432 1141 aa20.77■□□□□ 0.92
SF3B4-202ENST00000457312 UBE3BQ7Z3V4 1068 aa20.77■□□□□ 0.92
SF3B4-202ENST00000457312 ZNF576Q9H609 170 aa20.77■□□□□ 0.92
SF3B4-202ENST00000457312 CHD9Q3L8U1 2897 aa20.76■□□□□ 0.91
SF3B4-202ENST00000457312 TEKT1Q969V4 418 aa20.76■□□□□ 0.91
SF3B4-202ENST00000457312 RNPC3Q96LT9 517 aaKnown RBP20.76■□□□□ 0.91
SF3B4-202ENST00000457312 ZDHHC15Q96MV8 337 aa20.76■□□□□ 0.91
SF3B4-202ENST00000457312 PLA2G12BQ9BX93 195 aa20.76■□□□□ 0.91
SF3B4-202ENST00000457312 AGTPBP1Q9UPW5 1226 aa20.76■□□□□ 0.91
SF3B4-202ENST00000457312 AFG3L2Q9Y4W6 797 aa20.76■□□□□ 0.91
SF3B4-202ENST00000457312 ZHX2Q9Y6X8 837 aa20.76■□□□□ 0.91
SF3B4-202ENST00000457312 CYP2B6P20813 491 aa20.75■□□□□ 0.91
SF3B4-202ENST00000457312 APOBEC3HQ6NTF7 200 aaKnown RBP20.75■□□□□ 0.91
SF3B4-202ENST00000457312 GAS2L1Q99501 681 aaPredicted RBP20.75■□□□□ 0.91
SF3B4-202ENST00000457312 C11orf16Q9NQ32 467 aa20.75■□□□□ 0.91
SF3B4-202ENST00000457312 MAP3K2Q9Y2U5 619 aa20.75■□□□□ 0.91
SF3B4-202ENST00000457312 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
SF3B4-202ENST00000457312 BMP1P13497 986 aa20.74■□□□□ 0.91
SF3B4-202ENST00000457312 PNNQ9H307 717 aaKnown RBP20.74■□□□□ 0.91
SF3B4-202ENST00000457312 PRDM5Q9NQX1 630 aaPredicted RBP20.74■□□□□ 0.91
SF3B4-202ENST00000457312 PLXNA1Q9UIW2 1896 aa20.74■□□□□ 0.91
SF3B4-202ENST00000457312 CSF1RP07333 972 aa20.73■□□□□ 0.91
SF3B4-202ENST00000457312 PTPRAP18433 802 aa20.73■□□□□ 0.91
SF3B4-202ENST00000457312 TREML2Q5T2D2 321 aa20.73■□□□□ 0.91
SF3B4-202ENST00000457312 SCYL3Q8IZE3 742 aa20.73■□□□□ 0.91
SF3B4-202ENST00000457312 ATP11BQ9Y2G3 1177 aa20.73■□□□□ 0.91
SF3B4-202ENST00000457312 ATRNL1Q5VV63 1379 aa20.72■□□□□ 0.91
SF3B4-202ENST00000457312 H7C1W4 665 aa20.72■□□□□ 0.91
SF3B4-202ENST00000457312 TMPOP42166 694 aaKnown RBP20.72■□□□□ 0.91
SF3B4-202ENST00000457312 CWF19L2Q2TBE0 894 aaKnown RBP20.72■□□□□ 0.91
SF3B4-202ENST00000457312 FAM151AQ8WW52 585 aa20.72■□□□□ 0.91
SF3B4-202ENST00000457312 PNMA3Q9UL41 463 aa20.72■□□□□ 0.91
SF3B4-202ENST00000457312 CHD7Q9P2D1 2997 aa20.71■□□□□ 0.91
SF3B4-202ENST00000457312 XRCC5P13010 732 aaKnown RBP20.71■□□□□ 0.91
SF3B4-202ENST00000457312 ZKSCAN1P17029 563 aaPredicted RBP20.71■□□□□ 0.91
SF3B4-202ENST00000457312 GYG1P46976 350 aa20.71■□□□□ 0.91
SF3B4-202ENST00000457312 CCDC85BQ15834 202 aaPredicted RBP20.71■□□□□ 0.91
SF3B4-202ENST00000457312 TIFAQ96CG3 184 aa20.71■□□□□ 0.91
SF3B4-202ENST00000457312 PDLIM7Q9NR12 457 aa20.71■□□□□ 0.91
SF3B4-202ENST00000457312 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
SF3B4-202ENST00000457312 NEURL1BA8MQ27 555 aa20.7■□□□□ 0.9
SF3B4-202ENST00000457312 PHF20L1A8MW92 1017 aa20.7■□□□□ 0.9
SF3B4-202ENST00000457312 GPR37L1O60883 481 aa20.7■□□□□ 0.9
SF3B4-202ENST00000457312 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
SF3B4-202ENST00000457312 GCLCP48506 637 aaPredicted RBP20.7■□□□□ 0.9
SF3B4-202ENST00000457312 PRDM12Q9H4Q4 367 aa20.7■□□□□ 0.9
SF3B4-202ENST00000457312 PICK1Q9NRD5 415 aa20.7■□□□□ 0.9
SF3B4-202ENST00000457312 CXXC1Q9P0U4 656 aaPredicted RBP20.7■□□□□ 0.9
SF3B4-202ENST00000457312 FAM86C2PA6NEL3 165 aa20.69■□□□□ 0.9
SF3B4-202ENST00000457312 TRIM75PA6NK02 468 aa20.69■□□□□ 0.9
SF3B4-202ENST00000457312 EPHB4P54760 987 aa20.69■□□□□ 0.9
SF3B4-202ENST00000457312 ADGRE1Q14246 886 aa20.69■□□□□ 0.9
SF3B4-202ENST00000457312 SOCS4Q8WXH5 440 aa20.69■□□□□ 0.9
SF3B4-202ENST00000457312 LRRC37A2A6NM11 1700 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 TRIM43BA6NCK2 446 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 HIBADHP31937 336 aaKnown RBP20.68■□□□□ 0.9
SF3B4-202ENST00000457312 CASP7P55210 303 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 TCP10Q12799 353 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 SH3RF1Q7Z6J0 888 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 TRMT44Q8IYL2 757 aaKnown RBP20.68■□□□□ 0.9
SF3B4-202ENST00000457312 TRIM43Q96BQ3 446 aaPredicted RBP20.68■□□□□ 0.9
SF3B4-202ENST00000457312 FAM84BQ96KN1 310 aaPredicted RBP20.68■□□□□ 0.9
SF3B4-202ENST00000457312 NUDT12Q9BQG2 462 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 DAGLAQ9Y4D2 1042 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 ZDBF2Q9HCK1 2354 aa20.68■□□□□ 0.9
SF3B4-202ENST00000457312 CCL14Q16627 93 aa20.67■□□□□ 0.9
SF3B4-202ENST00000457312 MRIQ9BWK5 157 aa20.67■□□□□ 0.9
SF3B4-202ENST00000457312 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.67■□□□□ 0.9
SF3B4-202ENST00000457312 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.66■□□□□ 0.9
SF3B4-202ENST00000457312 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.66■□□□□ 0.9
SF3B4-202ENST00000457312 DNM1LO00429 736 aa20.66■□□□□ 0.9
SF3B4-202ENST00000457312 PLIN1O60240 522 aa20.66■□□□□ 0.9
SF3B4-202ENST00000457312 NFIAQ12857 509 aa20.66■□□□□ 0.9
SF3B4-202ENST00000457312 TRIM60Q495X7 471 aa20.66■□□□□ 0.9
SF3B4-202ENST00000457312 PI4KAP2A4QPH2 592 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 KCNQ1P51787 676 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 TFF2Q03403 129 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 CHAF1AQ13111 956 aaPredicted RBP20.65■□□□□ 0.9
SF3B4-202ENST00000457312 KSR2Q6VAB6 950 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 CCDC84Q86UT8 332 aaPredicted RBP20.65■□□□□ 0.9
SF3B4-202ENST00000457312 PI4KAP1Q8N8J0 262 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 TBC1D22AQ8WUA7 517 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 MORF4L1Q9UBU8 362 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 IQSEC3Q9UPP2 1182 aaPredicted RBP20.65■□□□□ 0.9
SF3B4-202ENST00000457312 MYH13Q9UKX3 1938 aa20.65■□□□□ 0.9
SF3B4-202ENST00000457312 ITGB8P26012 769 aa20.64■□□□□ 0.89
SF3B4-202ENST00000457312 NEXNQ0ZGT2 675 aa20.64■□□□□ 0.89
SF3B4-202ENST00000457312 SNX17Q15036 470 aa20.64■□□□□ 0.89
SF3B4-202ENST00000457312 PROCA1Q8NCQ7 364 aaPredicted RBP20.64■□□□□ 0.89
SF3B4-202ENST00000457312 USP6NLQ92738 828 aa20.64■□□□□ 0.89
SF3B4-202ENST00000457312 KHSRPQ92945 711 aaKnown RBP eCLIP20.64■□□□□ 0.89
SF3B4-202ENST00000457312 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
SF3B4-202ENST00000457312 ATAD5Q96QE3 1844 aa20.64■□□□□ 0.89
SF3B4-202ENST00000457312 GBF1Q92538 1859 aa20.63■□□□□ 0.89
SF3B4-202ENST00000457312 MAST3O60307 1309 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms