RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
PTCHD1-202ENST00000456522 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
PTCHD1-202ENST00000456522 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
PTCHD1-202ENST00000456522 POLLQ9UGP5 575 aa11.49□□□□□ -0.57
PTCHD1-202ENST00000456522 DBNLQ9UJU6 430 aaKnown RBP11.49□□□□□ -0.57
PTCHD1-202ENST00000456522 MX1P20591 662 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 SOGA3Q5TF21 947 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 EPS8L1Q8TE68 723 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 TSC1Q92574 1164 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 GPATCH3Q96I76 525 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 PODXL2Q9NZ53 605 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 LTBP1Q14766 1721 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 ARAP2Q8WZ64 1704 aa11.48□□□□□ -0.57
PTCHD1-202ENST00000456522 ARFGEF1Q9Y6D6 1849 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 NR1I2O75469 434 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 GYG1P46976 350 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 TTC39AQ5SRH9 613 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 VPS37DQ86XT2 251 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 SCUBE3Q8IX30 993 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 ADAMTS19Q8TE59 1207 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 PCDHB3Q9Y5E6 796 aa11.47□□□□□ -0.57
PTCHD1-202ENST00000456522 DUOX1Q9NRD9 1551 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 PHKA1P46020 1223 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 PDE1AP54750 535 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 CAVIN4Q5BKX8 364 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 CCDC158Q5M9N0 1113 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 CALR3Q96L12 384 aaKnown RBP11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 EYA3Q99504 573 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 ZC3H12CQ9C0D7 883 aaKnown RBP11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 ECHDC1Q9NTX5 307 aa11.46□□□□□ -0.57
PTCHD1-202ENST00000456522 FER1L6Q2WGJ9 1857 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 F12P00748 615 aaPredicted RBP11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 HIBADHP31937 336 aaKnown RBP11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 NR6A1Q15406 480 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 CCDC102BQ68D86 513 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 ARHGAP27Q6ZUM4 889 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 SUPT20HQ8NEM7 779 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 FAM84BQ96KN1 310 aaPredicted RBP11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 RTFDC1Q9BY42 306 aaPredicted RBP11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 STAP2Q9UGK3 403 aa11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 IQSEC3Q9UPP2 1182 aaPredicted RBP11.45□□□□□ -0.58
PTCHD1-202ENST00000456522 SNED1Q8TER0 1413 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 TTC41PQ6P2S7 1318 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 IRS2Q9Y4H2 1338 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 ERC2O15083 957 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 MAP4K4O95819 1239 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 AOC3Q16853 763 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 MSS51Q4VC12 460 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 C15orf52Q6ZUT6 534 aaKnown RBP11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 ZNF804AQ7Z570 1209 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 FBXO33Q7Z6M2 555 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 GNL3LQ9NVN8 582 aaKnown RBP11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 MYH13Q9UKX3 1938 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 CCDC88AQ3V6T2 1871 aa11.44□□□□□ -0.58
PTCHD1-202ENST00000456522 NFKBIEO00221 500 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 PPIP5K2O43314 1243 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 FRAT2O75474 233 aaPredicted RBP11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 GLRX3O76003 335 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 UQCRFS1P1P0C7P4 283 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 YBX3P16989 372 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 ATP5JP18859 108 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 RASSF7Q02833 373 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 SCARF1Q14162 830 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 GPR162Q16538 588 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 PTPRNQ16849 979 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 NYAP1Q6ZVC0 841 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 PI4K2BQ8TCG2 481 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 PSMD1Q99460 953 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 DNAJC2Q99543 621 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 TAOK3Q9H2K8 898 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 CHD4Q14839 1912 aa11.43□□□□□ -0.58
PTCHD1-202ENST00000456522 AOX1Q06278 1338 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 JUNDP17535 347 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 ARID4AP29374 1257 aaPredicted RBP11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 SOX11P35716 441 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 CHAF1AQ13111 956 aaPredicted RBP11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 TTC22Q5TAA0 569 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 PI16Q6UXB8 463 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 OSBPL3Q9H4L5 887 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 ALG2Q9H553 416 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 DBNDD1Q9H9R9 158 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 CD209Q9NNX6 404 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 JAG2Q9Y219 1238 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 AK9Q5TCS8 1911 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 AKAP11Q9UKA4 1901 aa11.42□□□□□ -0.58
PTCHD1-202ENST00000456522 ECE2O60344 883 aa11.41□□□□□ -0.58
PTCHD1-202ENST00000456522 IARSP41252 1262 aaKnown RBP11.41□□□□□ -0.58
PTCHD1-202ENST00000456522 MCAMP43121 646 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms