RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 GRK4P32298 578 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 GJA8P48165 433 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 PRRT2Q7Z6L0 340 aaPredicted RBP14.85□□□□□ -0.03
LMCD1-206ENST00000456506 ZNF384Q8TF68 577 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 CDCA7LQ96GN5 454 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 SIL1Q9H173 461 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 PRO3102Q9H379 93 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 COPRSQ9NQ92 184 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 PDS5AQ29RF7 1337 aaKnown RBP14.85□□□□□ -0.03
LMCD1-206ENST00000456506 DDX60LQ5H9U9 1706 aaKnown RBP14.84□□□□□ -0.03
LMCD1-206ENST00000456506 ENTPD3O75355 529 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 GJB1P08034 283 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 CCL5P13501 91 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 PTPRAP18433 802 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 RGS3P49796 1198 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 PRKCZQ05513 592 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 CCDC102BQ68D86 513 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 DDX4Q9NQI0 724 aaKnown RBP14.84□□□□□ -0.03
LMCD1-206ENST00000456506 DENND2AQ9ULE3 1009 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 GABRQQ9UN88 632 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
LMCD1-206ENST00000456506 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
LMCD1-206ENST00000456506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.84□□□□□ -0.03
LMCD1-206ENST00000456506 DDTLA6NHG4 134 aaPredicted RBP14.83□□□□□ -0.04
LMCD1-206ENST00000456506 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
LMCD1-206ENST00000456506 RASGRF1Q13972 1273 aa14.83□□□□□ -0.04
LMCD1-206ENST00000456506 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.04
LMCD1-206ENST00000456506 CEP126Q9P2H0 1117 aa14.83□□□□□ -0.04
LMCD1-206ENST00000456506 LRRFIP2Q9Y608 721 aaKnown RBP14.83□□□□□ -0.04
LMCD1-206ENST00000456506 COL2A1P02458 1487 aaPredicted RBP14.82□□□□□ -0.04
LMCD1-206ENST00000456506 LAMA3Q16787 3333 aa14.82□□□□□ -0.04
LMCD1-206ENST00000456506 FMNL1O95466 1100 aaPredicted RBP14.82□□□□□ -0.04
LMCD1-206ENST00000456506 UBTFL1P0CB47 393 aaPredicted RBP14.82□□□□□ -0.04
LMCD1-206ENST00000456506 HOXD10P28358 340 aa14.82□□□□□ -0.04
LMCD1-206ENST00000456506 RHBDL3P58872 404 aa14.82□□□□□ -0.04
LMCD1-206ENST00000456506 PARK7Q99497 189 aaKnown RBP14.82□□□□□ -0.04
LMCD1-206ENST00000456506 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.82□□□□□ -0.04
LMCD1-206ENST00000456506 SLC45A1Q9Y2W3 748 aa14.82□□□□□ -0.04
LMCD1-206ENST00000456506 MYH1P12882 1939 aa14.82□□□□□ -0.04
LMCD1-206ENST00000456506 RAET1EQ8TD07 263 aa14.81□□□□□ -0.04
LMCD1-206ENST00000456506 MEIS3Q99687 375 aa14.81□□□□□ -0.04
LMCD1-206ENST00000456506 SMC4Q9NTJ3 1288 aa14.81□□□□□ -0.04
LMCD1-206ENST00000456506 GNL3LQ9NVN8 582 aaKnown RBP14.81□□□□□ -0.04
LMCD1-206ENST00000456506 ZHX2Q9Y6X8 837 aa14.81□□□□□ -0.04
LMCD1-206ENST00000456506 FCGRTP55899 365 aa14.8□□□□□ -0.04
LMCD1-206ENST00000456506 TIMM10P62072 90 aa14.8□□□□□ -0.04
LMCD1-206ENST00000456506 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
LMCD1-206ENST00000456506 SLAIN1Q8ND83 568 aa14.8□□□□□ -0.04
LMCD1-206ENST00000456506 NKX2-3Q8TAU0 364 aa14.8□□□□□ -0.04
LMCD1-206ENST00000456506 UNC93B1Q9H1C4 597 aa14.8□□□□□ -0.04
LMCD1-206ENST00000456506 RBM27Q9P2N5 1060 aaKnown RBP14.8□□□□□ -0.04
LMCD1-206ENST00000456506 NOB1Q9ULX3 412 aaKnown RBP14.8□□□□□ -0.04
LMCD1-206ENST00000456506 MROH7-TTC4A0A0A0MT08 1334 aa14.8□□□□□ -0.04
LMCD1-206ENST00000456506 GPR75-ASB3A0A0A6YYF3 556 aa14.79□□□□□ -0.04
LMCD1-206ENST00000456506 CTNND1O60716 968 aaKnown RBP14.79□□□□□ -0.04
LMCD1-206ENST00000456506 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
LMCD1-206ENST00000456506 FLT3LGP49771 235 aa14.79□□□□□ -0.04
LMCD1-206ENST00000456506 MTX1Q13505 466 aa14.79□□□□□ -0.04
LMCD1-206ENST00000456506 FASTKD5Q7L8L6 764 aaKnown RBP14.79□□□□□ -0.04
LMCD1-206ENST00000456506 CCDC84Q86UT8 332 aaPredicted RBP14.79□□□□□ -0.04
LMCD1-206ENST00000456506 ZGPATQ8N5A5 531 aaKnown RBP14.79□□□□□ -0.04
LMCD1-206ENST00000456506 U2AF1L4Q8WU68 220 aaKnown RBP14.79□□□□□ -0.04
LMCD1-206ENST00000456506 RNF208Q9H0X6 261 aa14.79□□□□□ -0.04
LMCD1-206ENST00000456506 COL6A3P12111 3177 aa14.79□□□□□ -0.04
LMCD1-206ENST00000456506 A0A1B0GUL7 405 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 TBC1D12O60347 775 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 SGPL1O95470 568 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 BTDP43251 543 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 MECOMQ03112 1051 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 IRF5Q13568 498 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 PXYLP1Q8TE99 480 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 XAGE2Q96GT9 111 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 PICK1Q9NRD5 415 aa14.78□□□□□ -0.04
LMCD1-206ENST00000456506 ADCY3O60266 1144 aa14.77□□□□□ -0.05
LMCD1-206ENST00000456506 CT47B1P0C2W7 299 aaPredicted RBP14.77□□□□□ -0.05
LMCD1-206ENST00000456506 ELNP15502 786 aa14.77□□□□□ -0.05
LMCD1-206ENST00000456506 RRP1BQ14684 758 aaKnown RBP14.77□□□□□ -0.05
LMCD1-206ENST00000456506 TREML2Q5T2D2 321 aa14.77□□□□□ -0.05
LMCD1-206ENST00000456506 DZIP1Q86YF9 867 aaKnown RBP14.77□□□□□ -0.05
LMCD1-206ENST00000456506 PAK6Q9NQU5 681 aaPredicted RBP14.77□□□□□ -0.05
LMCD1-206ENST00000456506 ABCF2Q9UG63 623 aa14.77□□□□□ -0.05
LMCD1-206ENST00000456506 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.05
LMCD1-206ENST00000456506 FAM196BA6NMK8 535 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 ZBTB7BO15156 539 aaPredicted RBP14.76□□□□□ -0.05
LMCD1-206ENST00000456506 INHAP05111 366 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 UBXN2AP68543 259 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 TFCP2Q12800 502 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 PICALMQ13492 652 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 PI16Q6UXB8 463 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 GADL1Q6ZQY3 521 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 DPF3Q92784 378 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 NSUN4Q96CB9 384 aaKnown RBP14.76□□□□□ -0.05
LMCD1-206ENST00000456506 API5Q9BZZ5 524 aaKnown RBP14.76□□□□□ -0.05
LMCD1-206ENST00000456506 CRISPLD2Q9H0B8 497 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
LMCD1-206ENST00000456506 TRIM75PA6NK02 468 aa14.75□□□□□ -0.05
LMCD1-206ENST00000456506 FARP2O94887 1054 aaPredicted RBP14.75□□□□□ -0.05
LMCD1-206ENST00000456506 ZSCAN29Q8IWY8 852 aaPredicted RBP14.75□□□□□ -0.05
LMCD1-206ENST00000456506 HTATIP2Q9BUP3 242 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms