RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ERLIN1O75477 346 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 GRAMD1CQ8IYS0 662 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 FBXL16Q8N461 479 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 NKX2-3Q8TAU0 364 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 PHKBQ93100 1093 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 CDC5LQ99459 802 aaKnown RBP11.78□□□□□ -0.52
CLIP4-208ENST00000456385 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 ESF1Q9H501 851 aaKnown RBP11.78□□□□□ -0.52
CLIP4-208ENST00000456385 FAM204AQ9H8W3 233 aa11.78□□□□□ -0.52
CLIP4-208ENST00000456385 AKR1B15C9JRZ8 316 aaPredicted RBP11.77□□□□□ -0.52
CLIP4-208ENST00000456385 RNF113AO15541 343 aaKnown RBP11.77□□□□□ -0.52
CLIP4-208ENST00000456385 MYO1BO43795 1136 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 CORO7P57737 925 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 GRIN1Q05586 938 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 RBL2Q08999 1139 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 NR1I3Q14994 352 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 KRT40Q6A162 431 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 STK11IPQ8N1F8 1099 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 NOA1Q8NC60 698 aaKnown RBP11.77□□□□□ -0.52
CLIP4-208ENST00000456385 YY1AP1Q9H869 796 aa11.77□□□□□ -0.52
CLIP4-208ENST00000456385 LOC102724159A0A0B4J2E5 919 aa11.77□□□□□ -0.53
CLIP4-208ENST00000456385 FGAP02671 866 aa11.77□□□□□ -0.53
CLIP4-208ENST00000456385 SART3Q15020 963 aaKnown RBP11.77□□□□□ -0.53
CLIP4-208ENST00000456385 PWP2Q15269 919 aaKnown RBP11.77□□□□□ -0.53
CLIP4-208ENST00000456385 HSP90B2PQ58FF3 399 aa11.77□□□□□ -0.53
CLIP4-208ENST00000456385 LMBR1LQ6UX01 489 aa11.77□□□□□ -0.53
CLIP4-208ENST00000456385 MB21D2Q8IYB1 491 aaPredicted RBP11.77□□□□□ -0.53
CLIP4-208ENST00000456385 SLC35F6Q8N357 371 aa11.77□□□□□ -0.53
CLIP4-208ENST00000456385 SEC31BQ9NQW1 1179 aa11.77□□□□□ -0.53
CLIP4-208ENST00000456385 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
CLIP4-208ENST00000456385 FAM237AA0A1B0GTK4 181 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 GUCY2CP25092 1073 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 RABL6Q3YEC7 729 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-208ENST00000456385 SLC9C2Q5TAH2 1124 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 FAM71BQ8TC56 605 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 A0A087WZG4 1122 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 CTAGE9A4FU28 777 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLIP4-208ENST00000456385 POSTNQ15063 836 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 IMMTQ16891 758 aaKnown RBP11.76□□□□□ -0.53
CLIP4-208ENST00000456385 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 ATG9AQ7Z3C6 839 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 ACRBPQ8NEB7 543 aa11.76□□□□□ -0.53
CLIP4-208ENST00000456385 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
CLIP4-208ENST00000456385 GEMIN8Q9NWZ8 242 aaKnown RBP11.76□□□□□ -0.53
CLIP4-208ENST00000456385 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
CLIP4-208ENST00000456385 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 POLR2DO15514 142 aaKnown RBP11.75□□□□□ -0.53
CLIP4-208ENST00000456385 RNF40O75150 1001 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
CLIP4-208ENST00000456385 E2F4Q16254 413 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 NCAPH2Q6IBW4 605 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
CLIP4-208ENST00000456385 IGSF22Q8N9C0 903 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
CLIP4-208ENST00000456385 ANKRD24Q8TF21 1146 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 PPM1EQ8WY54 764 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 TNRQ92752 1358 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 A0A1B0GTH6 734 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 TTC39AQ5SRH9 613 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 NUTM2AQ8IVF1 878 aaPredicted RBP11.75□□□□□ -0.53
CLIP4-208ENST00000456385 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
CLIP4-208ENST00000456385 GDAP1L1Q96MZ0 367 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 SENP2Q9HC62 589 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
CLIP4-208ENST00000456385 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 SYF2O95926 243 aaKnown RBP11.74□□□□□ -0.53
CLIP4-208ENST00000456385 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 CASP14P31944 242 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 APTXQ7Z2E3 356 aaKnown RBP11.74□□□□□ -0.53
CLIP4-208ENST00000456385 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 CTAGE4Q8IX94 777 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
CLIP4-208ENST00000456385 PLEKHG1Q9ULL1 1385 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 STX17P56962 302 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 MORC3Q14149 939 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 KLHL10Q6JEL2 608 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.74□□□□□ -0.53
CLIP4-208ENST00000456385 RALYLQ86SE5 291 aaKnown RBP11.74□□□□□ -0.53
CLIP4-208ENST00000456385 PPFIBP1Q86W92 1011 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 MLKLQ8NB16 471 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 NCOA7Q8NI08 942 aa11.74□□□□□ -0.53
CLIP4-208ENST00000456385 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
CLIP4-208ENST00000456385 RGPD2P0DJD1 1756 aa11.73□□□□□ -0.53
CLIP4-208ENST00000456385 SARSP49591 514 aaKnown RBP11.73□□□□□ -0.53
CLIP4-208ENST00000456385 METAP2P50579 478 aaKnown RBP eCLIP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms