RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 KLHL14Q9P2G3 628 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 NSD3Q9BZ95 1437 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 SKIP12755 728 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 BRPF1P55201 1214 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 LRCH2Q5VUJ6 765 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 GBP5Q96PP8 586 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 ABCA9Q8IUA7 1624 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 TCOF1Q13428 1488 aaKnown RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 CDC25BP30305 580 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 MTHFSP49914 203 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 VPS37BQ9H9H4 285 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 ATF3P18847 181 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 HEATR3Q7Z4Q2 680 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 AACSQ86V21 672 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 PPP4R1Q8TF05 950 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 ATRIPQ8WXE1 791 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 OPTNQ96CV9 577 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 ADAMTS8Q9UP79 889 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 LRRD1A4D1F6 860 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 GNAT3A8MTJ3 354 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 HOOK2Q96ED9 719 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 IARSP41252 1262 aaKnown RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 SYCP2LQ5T4T6 812 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 DTX3LQ8TDB6 740 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 ABCA8O94911 1581 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 CDAN1Q8IWY9 1227 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 TRIM11Q96F44 468 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 MAP3K10Q02779 954 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 IKQ13123 557 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 KRR1Q13601 381 aaKnown RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 NONOQ15233 471 aaKnown RBP eCLIP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 RPUSD2Q8IZ73 545 aaKnown RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 RTEL1Q9NZ71 1219 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 MID2Q9UJV3 735 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 FBXO3Q9UK99 471 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 COPG1Q9Y678 874 aaKnown RBP5.81□□□□□ -1.48
CSMD3-204ENST00000455883 RAD54L2Q9Y4B4 1467 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 GOLGA8IPA6NC78 632 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 TMEM232C9JQI7 657 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 HMOX1P09601 288 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 KRT39Q6A163 491 aa5.81□□□□□ -1.48
CSMD3-204ENST00000455883 GOLGA8BA8MQT2 603 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 SLC5A1P13866 664 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 KCNJ6P48051 423 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 TDRD12Q587J7 1177 aaKnown RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 DENND2CQ68D51 928 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 GOLGA8MH3BSY2 632 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 RASGRF2O14827 1237 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 CEP85LQ5SZL2 805 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 NUTM2GQ5VZR2 741 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 C8orf74Q6P047 294 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 ZNF710Q8N1W2 664 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 FSIP1Q8NA03 581 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 MRFAP1L1Q96HT8 127 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 PAWRQ96IZ0 340 aaKnown RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 OLFM3Q96PB7 478 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 NAPGQ99747 312 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 TM6SF1Q9BZW5 370 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 CCDC113Q9H0I3 377 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 KDM5BQ9UGL1 1544 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 RSPH10B2B2RC85 870 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 PPP1R12AO14974 1030 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 RSPH10BP0C881 870 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 MXRA7P84157 204 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 CEP57Q86XR8 500 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 CNNM1Q9NRU3 951 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 SERPINB10P48595 397 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 IGBP1P78318 339 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 MYL5Q02045 173 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 CCDC25Q86WR0 208 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 POP5Q969H6 163 aaKnown RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 TEKT2Q9UIF3 430 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 SCINQ9Y6U3 715 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 ZNF213O14771 459 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 ITIH3Q06033 890 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 LRRC8BQ6P9F7 803 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 SIL1Q9H173 461 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 IFT122Q9HBG6 1241 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 AKR1B15C9JRZ8 316 aaPredicted RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 LAD1O00515 517 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 DDX5P17844 614 aaKnown RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 ZNF76P36508 570 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 FKBP4Q02790 459 aaKnown RBP eCLIP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 PANK1Q8TE04 598 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 VEZTQ9HBM0 779 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 EXOC7Q9UPT5 735 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 ARHGEF10O15013 1369 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 ZNF518AQ6AHZ1 1483 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 TET3O43151 1660 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 DTNBO60941 627 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 NUCB1Q02818 461 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 ZNF449Q6P9G9 518 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 TMC6Q7Z403 805 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 PSMD1Q99460 953 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 NOB1Q9ULX3 412 aaKnown RBP5.8□□□□□ -1.48
CSMD3-204ENST00000455883 MAD1L1Q9Y6D9 718 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 HLA-DOAP06340 250 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 TTC22Q5TAA0 569 aa5.8□□□□□ -1.48
CSMD3-204ENST00000455883 GOPCQ9HD26 462 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms