RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 ATP11BQ9Y2G3 1177 aa12.23□□□□□ -0.45
NIPSNAP1-204ENST00000455496 DNAH12Q6ZR08 3092 aa12.23□□□□□ -0.45
NIPSNAP1-204ENST00000455496 DOCK3Q8IZD9 2030 aa12.23□□□□□ -0.45
NIPSNAP1-204ENST00000455496 CYP2B6P20813 491 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 IGFBP4P22692 258 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 CACNB3P54284 484 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 CHRNDQ07001 517 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 GOLGA2Q08379 1002 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 NOL9Q5SY16 702 aaKnown RBP12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 FKBP1CQ5VVH2 108 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 PLEKHF1Q96S99 279 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 PRDM12Q9H4Q4 367 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 ARAP2Q8WZ64 1704 aa12.22□□□□□ -0.45
NIPSNAP1-204ENST00000455496 PRR33A8MZF0 331 aa12.21□□□□□ -0.45
NIPSNAP1-204ENST00000455496 XRCC5P13010 732 aaKnown RBP12.21□□□□□ -0.45
NIPSNAP1-204ENST00000455496 CACNB2Q08289 660 aaPredicted RBP12.21□□□□□ -0.45
NIPSNAP1-204ENST00000455496 CCDC146Q8IYE0 955 aa12.21□□□□□ -0.45
NIPSNAP1-204ENST00000455496 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
NIPSNAP1-204ENST00000455496 TCF20Q9UGU0 1960 aaKnown RBP12.21□□□□□ -0.46
NIPSNAP1-204ENST00000455496 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
NIPSNAP1-204ENST00000455496 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
NIPSNAP1-204ENST00000455496 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
NIPSNAP1-204ENST00000455496 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 SNAP23O00161 211 aa12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 GCLCP48506 637 aaPredicted RBP12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TFF2Q03403 129 aa12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 PICK1Q9NRD5 415 aa12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
NIPSNAP1-204ENST00000455496 MYO9BQ13459 2157 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 PI4K2BG5E9Z4 385 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 DNM1LO00429 736 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 ITGA6P23229 1130 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 KCNQ1P51787 676 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 ADGRE1Q14246 886 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 SOCS4Q8WXH5 440 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TEKT1Q969V4 418 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 AGTPBP1Q9UPW5 1226 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 AFG3L2Q9Y4W6 797 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 LTBP2Q14767 1821 aa12.18□□□□□ -0.46
NIPSNAP1-204ENST00000455496 ST18O60284 1047 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 MSCO60682 206 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TAF5LO75529 589 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 HOXB7P09629 217 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 KRT24Q2M2I5 525 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 SLC39A5Q6ZMH5 540 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 UIMC1Q96RL1 719 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 MAST2Q6P0Q8 1798 aa12.17□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TRIM43BA6NCK2 446 aa12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 ERC2O15083 957 aa12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 PTPRAP18433 802 aa12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 CCDC129Q6ZRS4 1044 aa12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 FAM151AQ8WW52 585 aa12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 LPAR1Q92633 364 aa12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TRIM43Q96BQ3 446 aaPredicted RBP12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 FBXL18Q96ME1 805 aa12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
NIPSNAP1-204ENST00000455496 XIRP2A4UGR9 3374 aa12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 APAF1O14727 1248 aa12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 SCYL3Q8IZE3 742 aa12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TDRD7Q8NHU6 1098 aaKnown RBP12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 HERVK_113Q902F9 699 aa12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 ZDHHC15Q96MV8 337 aa12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 MRIQ9BWK5 157 aa12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.46
NIPSNAP1-204ENST00000455496 EPHB4P54760 987 aa12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 RIPK4P57078 832 aa12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 PABPC4Q13310 644 aaKnown RBP eCLIP12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 NEUROD2Q15784 382 aa12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 TRIM60Q495X7 471 aa12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 SH3RF1Q7Z6J0 888 aa12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 PBX4Q9BYU1 374 aa12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 DDX20Q9UHI6 824 aaKnown RBP12.14□□□□□ -0.47
NIPSNAP1-204ENST00000455496 TRIM75PA6NK02 468 aa12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 RGS2P41220 211 aa12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 FPGSQ05932 587 aa12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 CSPP1Q1MSJ5 1256 aa12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 APOBEC3HQ6NTF7 200 aaKnown RBP12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 MICALL1Q8N3F8 863 aa12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
NIPSNAP1-204ENST00000455496 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 TLL1O43897 1013 aa12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 RAG1P15918 1043 aa12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 PBX2P40425 430 aa12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 SNX17Q15036 470 aa12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 TREML2Q5T2D2 321 aa12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
NIPSNAP1-204ENST00000455496 PHAXQ9H814 394 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms