RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CEMIPQ8WUJ3 1361 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 GIPC1O14908 333 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 CYP27B1O15528 508 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 RNMTO43148 476 aaKnown RBP6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 GNRH1P01148 92 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 PDGFAP04085 211 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 CT47B1P0C2W7 299 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 IL2RBP14784 551 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 PHKG2P15735 406 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 RARSP54136 660 aaKnown RBP6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 PSMA6P60900 246 aaKnown RBP6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 TAF7LQ5H9L4 462 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 MPRIPQ6WCQ1 1025 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 ANKS3Q6ZW76 656 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 IFNL2Q8IZJ0 200 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 STAG2Q8N3U4 1231 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 RASGRP4Q8TDF6 673 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 NGLY1Q96IV0 654 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 C2orf49Q9BVC5 232 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 OSBPL3Q9H4L5 887 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 QTRT2Q9H974 415 aaKnown RBP6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 BABAM1Q9NWV8 329 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 MIS18AQ9NYP9 233 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 NWD2Q9ULI1 1742 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 OVOS2A0A0G2JMS6 1433 aa6.5□□□□□ -1.37
HMGB1P4-201ENST00000455362 OPLAHO14841 1288 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 VAMP4O75379 141 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 BCAR3O75815 825 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 EIF3JO75822 258 aaKnown RBP6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 RGS20O76081 388 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 GGCXP38435 758 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 EPHA4P54764 986 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 RRP1P56182 461 aaKnown RBP6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 TRIM32Q13049 653 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 TBCELQ5QJ74 424 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 MEI1Q5TIA1 1274 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 UNC5CLQ8IV45 518 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SLC9A9Q8IVB4 645 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SMC5Q8IY18 1101 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 ANKLE1Q8NAG6 615 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 C8orf58Q8NAV2 365 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 EHBP1Q8NDI1 1231 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 JDP2Q8WYK2 163 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 MYO19Q96H55 970 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SLC4A9Q96Q91 983 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 DEPDC7Q96QD5 511 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SPON2Q9BUD6 331 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 FANCLQ9NW38 375 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 LRFN2Q9ULH4 789 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 PKD1L3Q7Z443 1732 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SLIT2O94813 1529 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SCN11AQ9UI33 1791 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SPATA31A1Q5TZJ5 1347 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SPATA31A5Q5VU36 1347 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 SPATA31A7Q8IWB4 1347 aa6.49□□□□□ -1.37
HMGB1P4-201ENST00000455362 NRAPQ86VF7 1730 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 PARP4Q9UKK3 1724 aaKnown RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 LRRC37A3O60309 1634 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 A6NJY4 79 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 PLIN1O60240 522 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 CPNE3O75131 537 aaKnown RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 STAU1O95793 577 aaKnown RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 HSP90AB1P08238 724 aaKnown RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 FSHRP23945 695 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 ZAP70P43403 619 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 NASPP49321 788 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 ST13P50502 369 aaKnown RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 IRX6P78412 446 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 TEFQ10587 303 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 C8orf34Q49A92 452 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 LIAT1Q6ZQX7 453 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 NBPF15Q8N660 670 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 TSPYL6Q8N831 410 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 APPBP2Q92624 585 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 DCAF5Q96JK2 942 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 CEP89Q96ST8 783 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 ETNK1Q9HBU6 452 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 TSPYL4Q9UJ04 414 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 THRAP3Q9Y2W1 955 aaKnown RBP6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 MRVI1Q9Y6F6 885 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 ADAMTS7Q9UKP4 1686 aa6.48□□□□□ -1.37
HMGB1P4-201ENST00000455362 BCL9LQ86UU0 1499 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 LRP6O75581 1613 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 SIPA1L3O60292 1781 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 EXOC5O00471 708 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 ELL2O00472 640 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 PDGFRBP09619 1106 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 AMPD3Q01432 767 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 VPS72Q15906 364 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 KRT24Q2M2I5 525 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 TWISTNBQ3B726 338 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 ALDH1L2Q3SY69 923 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 ARSHQ5FYA8 562 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 ERICH6BQ5W0A0 696 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 ERMP1Q7Z2K6 904 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 KIAA0825Q8IV33 1275 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms