RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 M0R2C6 588 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 CDCA5Q96FF9 252 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 FAM227BQ96M60 508 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 TEPSINQ96N21 525 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 DDX4Q9NQI0 724 aaKnown RBP17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 MKRN1Q9UHC7 482 aaKnown RBP17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
HMGXB4-204ENST00000455359 A0A0D9SFI3 127 aa17.15■□□□□ 0.34
HMGXB4-204ENST00000455359 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-204ENST00000455359 CDC45O75419 566 aa17.15■□□□□ 0.34
HMGXB4-204ENST00000455359 FKBP1BP68106 108 aa17.15■□□□□ 0.34
HMGXB4-204ENST00000455359 PICALMQ13492 652 aa17.15■□□□□ 0.34
HMGXB4-204ENST00000455359 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
HMGXB4-204ENST00000455359 TMEM39BQ9GZU3 492 aa17.15■□□□□ 0.34
HMGXB4-204ENST00000455359 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
HMGXB4-204ENST00000455359 TTC6Q86TZ1 520 aa17.14■□□□□ 0.33
HMGXB4-204ENST00000455359 MAPKAPK5Q8IW41 473 aa17.14■□□□□ 0.33
HMGXB4-204ENST00000455359 SEC62Q99442 399 aaKnown RBP17.14■□□□□ 0.33
HMGXB4-204ENST00000455359 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
HMGXB4-204ENST00000455359 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
HMGXB4-204ENST00000455359 UNCXA6NJT0 531 aa17.13■□□□□ 0.33
HMGXB4-204ENST00000455359 GSG1L2A8MUP6 293 aa17.13■□□□□ 0.33
HMGXB4-204ENST00000455359 TCP10Q12799 353 aa17.13■□□□□ 0.33
HMGXB4-204ENST00000455359 ZSCAN29Q8IWY8 852 aaPredicted RBP17.13■□□□□ 0.33
HMGXB4-204ENST00000455359 AMOTL1Q8IY63 956 aa17.13■□□□□ 0.33
HMGXB4-204ENST00000455359 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
HMGXB4-204ENST00000455359 TRAF5O00463 557 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 PRKAB2O43741 272 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 TBC1D12O60347 775 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 MAP3K10Q02779 954 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 ALX1Q15699 326 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 DCAF15Q66K64 600 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 FOXP4Q8IVH2 680 aaPredicted RBP17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 ZFPM1Q8IX07 1006 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 SDR42E1Q8WUS8 393 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 MCM9Q9NXL9 1143 aa17.12■□□□□ 0.33
HMGXB4-204ENST00000455359 SGSM2O43147 1006 aa17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 PPP1R12BO60237 982 aaPredicted RBP17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 APPP05067 770 aa17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 SH3BP5LQ7L8J4 393 aa17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 IFNL3Q8IZI9 196 aa17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 CSRNP1Q96S65 589 aa17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 EHD4Q9H223 541 aa17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 ARPP21Q9UBL0 812 aaPredicted RBP17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
HMGXB4-204ENST00000455359 ZMYM6O95789 1325 aa17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 DDTLA6NHG4 134 aaPredicted RBP17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 EIF5BO60841 1220 aaKnown RBP17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 HSPD1P10809 573 aaKnown RBP17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 CCDC129Q6ZRS4 1044 aa17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 DSCC1Q9BVC3 393 aa17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 HERC5Q9UII4 1024 aaKnown RBP17.1■□□□□ 0.33
HMGXB4-204ENST00000455359 TDO2P48775 406 aa17.09■□□□□ 0.33
HMGXB4-204ENST00000455359 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
HMGXB4-204ENST00000455359 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
HMGXB4-204ENST00000455359 ARMC9Q7Z3E5 817 aa17.09■□□□□ 0.33
HMGXB4-204ENST00000455359 C2orf69Q8N8R5 385 aa17.09■□□□□ 0.33
HMGXB4-204ENST00000455359 ESYT1Q9BSJ8 1104 aa17.09■□□□□ 0.33
HMGXB4-204ENST00000455359 PALD1Q9ULE6 856 aa17.09■□□□□ 0.33
HMGXB4-204ENST00000455359 TMEM88BA6NKF7 163 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 APLP1P51693 650 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 C1QTNF8P60827 252 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 C12orf60Q5U649 245 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 CST9Q5W186 159 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 CTR9Q6PD62 1173 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 KIAA1211Q6ZU35 1233 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 ZNF341Q9BYN7 854 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 NAPBQ9H115 298 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 GBA2Q9HCG7 927 aaPredicted RBP17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 EPB41L4AQ9HCS5 686 aaPredicted RBP17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 CTNNA3Q9UI47 895 aa17.08■□□□□ 0.32
HMGXB4-204ENST00000455359 MYO5AQ9Y4I1 1855 aaKnown RBP17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 USP17L12C9JPN9 530 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 USP17L21D6R901 530 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 IREB2P48200 963 aaKnown RBP17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 DLK2Q6UY11 383 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 CDAN1Q8IWY9 1227 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 SERPINB13Q9UIV8 391 aa17.07■□□□□ 0.32
HMGXB4-204ENST00000455359 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 FOXP2O15409 715 aa17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 SLC3A2P08195 630 aaKnown RBP17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 VPS53Q5VIR6 699 aa17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 HHIPL1Q96JK4 782 aa17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 ZNF112Q9UJU3 913 aa17.06■□□□□ 0.32
HMGXB4-204ENST00000455359 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms