RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 MAP1SQ66K74 1059 aaPredicted RBP11.37□□□□□ -0.59
ATXN3-205ENST00000454964 USP48Q86UV5 1035 aa11.37□□□□□ -0.59
ATXN3-205ENST00000454964 ZSCAN29Q8IWY8 852 aaPredicted RBP11.37□□□□□ -0.59
ATXN3-205ENST00000454964 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
ATXN3-205ENST00000454964 TRIM34Q9BYJ4 488 aa11.37□□□□□ -0.59
ATXN3-205ENST00000454964 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
ATXN3-205ENST00000454964 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
ATXN3-205ENST00000454964 FOCADQ5VW36 1801 aa11.37□□□□□ -0.59
ATXN3-205ENST00000454964 MYH1P12882 1939 aa11.37□□□□□ -0.59
ATXN3-205ENST00000454964 SHTN1A0MZ66 631 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 TCP10L2B9ZVM9 353 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 EGFRP00533 1210 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
ATXN3-205ENST00000454964 RGS3P49796 1198 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 APLP1P51693 650 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 RHBDL3P58872 404 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 TSHZ3Q63HK5 1081 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 KIAA1211Q6ZU35 1233 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 TGFBRAP1Q8WUH2 860 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 STRBPQ96SI9 672 aaKnown RBP11.36□□□□□ -0.59
ATXN3-205ENST00000454964 RIOK1Q9BRS2 568 aaKnown RBP11.36□□□□□ -0.59
ATXN3-205ENST00000454964 TBC1D2Q9BYX2 928 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 NDUFB9Q9Y6M9 179 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 SLC4A4Q9Y6R1 1079 aa11.36□□□□□ -0.59
ATXN3-205ENST00000454964 EPB41L2O43491 1005 aaKnown RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 APPP05067 770 aa11.35□□□□□ -0.59
ATXN3-205ENST00000454964 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 ALX1Q15699 326 aa11.35□□□□□ -0.59
ATXN3-205ENST00000454964 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
ATXN3-205ENST00000454964 SH3RF3Q8TEJ3 882 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 ZNF384Q8TF68 577 aa11.35□□□□□ -0.59
ATXN3-205ENST00000454964 EDC3Q96F86 508 aaKnown RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 OSBPL5Q9H0X9 879 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 EHD4Q9H223 541 aa11.35□□□□□ -0.59
ATXN3-205ENST00000454964 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-205ENST00000454964 ATRNL1Q5VV63 1379 aa11.35□□□□□ -0.59
ATXN3-205ENST00000454964 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
ATXN3-205ENST00000454964 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 GPAA1O43292 621 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 CDC45O75419 566 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 MBD4O95243 580 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 C1QTNF8P60827 252 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 MAP3K10Q02779 954 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 MAP3K11Q16584 847 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 SBK1Q52WX2 424 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 CSRNP1Q96S65 589 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 ZNF341Q9BYN7 854 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
ATXN3-205ENST00000454964 PUS7LQ9H0K6 701 aaKnown RBP11.34□□□□□ -0.59
ATXN3-205ENST00000454964 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 SWAP70Q9UH65 585 aa11.34□□□□□ -0.59
ATXN3-205ENST00000454964 CELF2O95319 508 aaKnown RBP11.33□□□□□ -0.6
ATXN3-205ENST00000454964 ECE1P42892 770 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 TCP10Q12799 353 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
ATXN3-205ENST00000454964 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
ATXN3-205ENST00000454964 ADGRA1Q86SQ6 560 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 METTL16Q86W50 562 aaKnown RBP11.33□□□□□ -0.6
ATXN3-205ENST00000454964 ANKRD13AQ8IZ07 590 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 CRACR2BQ8N4Y2 399 aaPredicted RBP11.33□□□□□ -0.6
ATXN3-205ENST00000454964 OSBP2Q969R2 916 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 CCDC102AQ96A19 550 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 DSCC1Q9BVC3 393 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 NAPBQ9H115 298 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 GBA2Q9HCG7 927 aaPredicted RBP11.33□□□□□ -0.6
ATXN3-205ENST00000454964 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 FAM198AQ9UFP1 575 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 GTF3C3Q9Y5Q9 886 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 CSADQ9Y600 493 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 ZMYM6O95789 1325 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 CCDC171Q6TFL3 1326 aa11.33□□□□□ -0.6
ATXN3-205ENST00000454964 CTNND1O60716 968 aaKnown RBP11.32□□□□□ -0.6
ATXN3-205ENST00000454964 REC8O95072 547 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 GSPT1P15170 499 aaKnown RBP11.32□□□□□ -0.6
ATXN3-205ENST00000454964 CHMLP26374 656 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 TDO2P48775 406 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 PDE4BQ07343 736 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 PICALMQ13492 652 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 CCDC17Q96LX7 622 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 ARMT1Q9H993 441 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 DCP1AQ9NPI6 582 aaPredicted RBP11.32□□□□□ -0.6
ATXN3-205ENST00000454964 FLT1P17948 1338 aa11.32□□□□□ -0.6
ATXN3-205ENST00000454964 MYH8P13535 1937 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 INHBEP58166 350 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 DYNLL1P63167 89 aaKnown RBP11.31□□□□□ -0.6
ATXN3-205ENST00000454964 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-205ENST00000454964 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 MAPKAPK5Q8IW41 473 aa11.31□□□□□ -0.6
ATXN3-205ENST00000454964 IFNL3Q8IZI9 196 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms