RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SMTNL1A8MU46 457 aa12.81□□□□□ -0.36
DDR1-240ENST00000454612 ZFYP08048 801 aaPredicted RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 MCM7P33993 719 aa12.81□□□□□ -0.36
DDR1-240ENST00000454612 IKQ13123 557 aaPredicted RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 FAM98CQ17RN3 349 aaKnown RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 SMYD4Q8IYR2 804 aaPredicted RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
DDR1-240ENST00000454612 CCT6AP40227 531 aaKnown RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 ADKP55263 362 aaKnown RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 KCNF1Q9H3M0 494 aa12.81□□□□□ -0.36
DDR1-240ENST00000454612 SAP30BPQ9UHR5 308 aaKnown RBP12.81□□□□□ -0.36
DDR1-240ENST00000454612 ZNF609O15014 1411 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
DDR1-240ENST00000454612 H7C1W4 665 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 EIF6P56537 245 aaKnown RBP12.8□□□□□ -0.36
DDR1-240ENST00000454612 ELF2Q15723 593 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 IFIT1BQ5T764 474 aaKnown RBP12.8□□□□□ -0.36
DDR1-240ENST00000454612 IQCA1Q86XH1 822 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 DYNLL1P63167 89 aaKnown RBP12.8□□□□□ -0.36
DDR1-240ENST00000454612 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
DDR1-240ENST00000454612 SMARCE1Q969G3 411 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 TTF1Q15361 905 aaPredicted RBP12.8□□□□□ -0.36
DDR1-240ENST00000454612 FKBP15Q5T1M5 1219 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 FBXO18Q8NFZ0 1043 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
DDR1-240ENST00000454612 KIAA1524Q8TCG1 905 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 DSCC1Q9BVC3 393 aa12.8□□□□□ -0.36
DDR1-240ENST00000454612 WTIPA6NIX2 430 aaPredicted RBP12.79□□□□□ -0.36
DDR1-240ENST00000454612 FOXN1O15353 648 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 CTSWP56202 376 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 NBPF5PQ86XG9 351 aaPredicted RBP12.79□□□□□ -0.36
DDR1-240ENST00000454612 GPR101Q96P66 508 aaPredicted RBP12.79□□□□□ -0.36
DDR1-240ENST00000454612 ZNF215Q9UL58 517 aaPredicted RBP12.79□□□□□ -0.36
DDR1-240ENST00000454612 KCNH3Q9ULD8 1083 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 MEGF6O75095 1541 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 CACNA1FO60840 1977 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 FAM193AP78312 1265 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 FANCCQ00597 558 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 CYB5R4Q7L1T6 521 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 MCM9Q9NXL9 1143 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
DDR1-240ENST00000454612 ZPR1O75312 459 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
DDR1-240ENST00000454612 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 CATIPQ7Z7H3 387 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 AMOTL1Q8IY63 956 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
DDR1-240ENST00000454612 SH3TC1Q8TE82 1336 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 HEG1Q9ULI3 1381 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 IFNL3Q8IZI9 196 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 TTLL11Q8NHH1 800 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 MAGEB6P1A0A0J9YX57 407 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 KIF28PB7ZC32 967 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 CTDNEP1O95476 244 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 NOM1Q5C9Z4 860 aaKnown RBP12.78□□□□□ -0.36
DDR1-240ENST00000454612 ZBTB38Q8NAP3 1195 aaPredicted RBP12.78□□□□□ -0.36
DDR1-240ENST00000454612 SERTAD1Q9UHV2 236 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 USP54Q70EL1 1684 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 PDE8BO95263 885 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 NLRP10Q86W26 655 aa12.78□□□□□ -0.36
DDR1-240ENST00000454612 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
DDR1-240ENST00000454612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDR1-240ENST00000454612 PUF60Q9UHX1 559 aaKnown RBP12.78□□□□□ -0.36
DDR1-240ENST00000454612 C6orf229H3BNL8 230 aa12.77□□□□□ -0.36
DDR1-240ENST00000454612 SMIM22K7EJ46 135 aa12.77□□□□□ -0.36
DDR1-240ENST00000454612 PDE8AO60658 829 aa12.77□□□□□ -0.36
DDR1-240ENST00000454612 RBM5P52756 815 aaKnown RBP eCLIP12.77□□□□□ -0.36
DDR1-240ENST00000454612 LCORLQ8N3X6 602 aa12.77□□□□□ -0.36
DDR1-240ENST00000454612 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.36
DDR1-240ENST00000454612 TEX13AQ9BXU3 409 aaPredicted RBP12.77□□□□□ -0.36
DDR1-240ENST00000454612 SPATA31A6Q5VVP1 1343 aa12.77□□□□□ -0.36
DDR1-240ENST00000454612 USP17L12C9JPN9 530 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 USP17L21D6R901 530 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 CDC27P30260 824 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 PICALMQ13492 652 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 FILIP1LQ4L180 1135 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 VPS16Q9H269 839 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 PCDHA5Q9Y5H7 936 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 MPHOSPH10O00566 681 aaKnown RBP12.77□□□□□ -0.37
DDR1-240ENST00000454612 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 KIF4BQ2VIQ3 1234 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 RASGRP4Q8TDF6 673 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
DDR1-240ENST00000454612 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
DDR1-240ENST00000454612 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
DDR1-240ENST00000454612 IDEP14735 1019 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms