RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ANKRD23Q86SG2 305 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DIS3LQ8TF46 1054 aaKnown RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FAM151AQ8WW52 585 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 LPIN2Q92539 896 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DPF3Q92784 378 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PARK7Q99497 189 aaKnown RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 MEIS3Q99687 375 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 RNF208Q9H0X6 261 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 USP40Q9NVE5 1235 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ZNF112Q9UJU3 913 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 KCNH4Q9UQ05 1017 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 TNNQ9UQP3 1299 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ZHX2Q9Y6X8 837 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DDX60LQ5H9U9 1706 aaKnown RBP7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PTPRCP08575 1304 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 KIF16BQ96L93 1317 aa7.49□□□□□ -1.21
HLA-DPA3-207ENST00000454398 UNC80Q8N2C7 3258 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DDTLA6NHG4 134 aaPredicted RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PHF20L1A8MW92 1017 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 WDHD1O75717 1129 aaPredicted RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 INHAP05111 366 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 UBTFL1P0CB47 393 aaPredicted RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 BCRP11274 1271 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FLT3LGP49771 235 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 NOL9Q5SY16 702 aaKnown RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FKBP1CQ5VVH2 108 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DZIP1Q86YF9 867 aaKnown RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 WDR66Q8TBY9 1149 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SMCR8Q8TEV9 937 aaPredicted RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 U2AF1L4Q8WU68 220 aaKnown RBP7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 CDK5RAP2Q96SN8 1893 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PICK1Q9NRD5 415 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ABCF2Q9UG63 623 aa7.48□□□□□ -1.21
HLA-DPA3-207ENST00000454398 EYSQ5T1H1 3165 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 MYO5AQ9Y4I1 1855 aaKnown RBP7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 A0A0G2JLL6 359 aaPredicted RBP7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 TNPO2O14787 897 aaKnown RBP7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PTPRAP18433 802 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 BTDP43251 543 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 FCGRTP55899 365 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 JAG1P78504 1218 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 TRIM32Q13049 653 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ARHGEF6Q15052 776 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 CCDC102BQ68D86 513 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 POTEEQ6S8J3 1075 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PRRT2Q7Z6L0 340 aaPredicted RBP7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 SCYL3Q8IZE3 742 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ANKRD13CQ8N6S4 541 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 HOOK2Q96ED9 719 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 LRCH3Q96II8 777 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 DEFB118Q96PH6 123 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 ZCCHC17Q9NP64 241 aaKnown RBP7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 PLXNB2O15031 1838 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 GAKO14976 1311 aa7.47□□□□□ -1.21
HLA-DPA3-207ENST00000454398 VCANP13611 3396 aa7.46□□□□□ -1.21
HLA-DPA3-207ENST00000454398 CDH23Q9H251 3354 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ADCY3O60266 1144 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GJB1P08034 283 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GJA8P48165 433 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MNX1P50219 401 aaPredicted RBP7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MECOMQ03112 1051 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TBC1D9Q6ZT07 1266 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ZMYND8Q9ULU4 1186 aaPredicted RBP7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SUGT1Q9Y2Z0 365 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MROH7-TTC4A0A0A0MT08 1334 aa7.46□□□□□ -1.22
HLA-DPA3-207ENST00000454398 DNAH12Q6ZR08 3092 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 E9PSI1 815 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SYN1P17600 705 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 HMGCS2P54868 508 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TIMM10P62072 90 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 TFCP2Q12800 502 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 C7orf61Q8IZ16 206 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SLAIN1Q8ND83 568 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MRIQ9BWK5 157 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CEP126Q9P2H0 1117 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 NOB1Q9ULX3 412 aaKnown RBP7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 AFG3L2Q9Y4W6 797 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SALL1Q9NSC2 1324 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 FRMPD3Q5JV73 1810 aa7.45□□□□□ -1.22
HLA-DPA3-207ENST00000454398 FOCADQ5VW36 1801 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 A0A1B0GUL7 405 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ZNF316A6NFI3 1004 aaPredicted RBP7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 ZBTB7BO15156 539 aaPredicted RBP7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 CIAO1O76071 339 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GNRH1P01148 92 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 IL15P40933 162 aaPredicted RBP7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PRMT2P55345 433 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 RHBDL3P58872 404 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 UBXN2AP68543 259 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MAP3K10Q02779 954 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 SLFN5Q08AF3 891 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 MTMR2Q13614 643 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 Q7L0L9 218 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 XAGE2Q96GT9 111 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 PAWRQ96IZ0 340 aaKnown RBP7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 IDI2Q9BXS1 227 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 GNL3LQ9NVN8 582 aaKnown RBP7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 STAP2Q9UGK3 403 aa7.44□□□□□ -1.22
HLA-DPA3-207ENST00000454398 DENND2AQ9ULE3 1009 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms