RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 ABCC12Q96J65 1359 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 ANO9A1A5B4 782 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 MAP3K7O43318 606 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 SMARCA5O60264 1052 aaPredicted RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 PFKFB2O60825 505 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 SHOX2O60902 331 aaPredicted RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 NR1I2O75469 434 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 SURF6O75683 361 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 LUC7L3O95232 432 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 INPP5BP32019 993 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 RFC5P40937 340 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 UBASH3AP57075 661 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 SLC8A3P57103 927 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 GNG11P61952 73 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 ICA1Q05084 483 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 EN1Q05925 392 aaPredicted RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 NNTQ13423 1086 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CRYMQ14894 314 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 STK38Q15208 465 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 NECTIN1Q15223 517 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CAMK4Q16566 473 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CCDC144BQ3MJ40 725 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 NUTM2GQ5VZR2 741 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CREB3L3Q68CJ9 461 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 ASTLQ6HA08 431 aaPredicted RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 RCSD1Q6JBY9 416 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 TMED8Q6PL24 325 aaPredicted RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CWC27Q6UX04 472 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 SYNE3Q6ZMZ3 975 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 UBE3BQ7Z3V4 1068 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 WAPLQ7Z5K2 1190 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 PPFIBP1Q86W92 1011 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 DHX40Q8IX18 779 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CCDC144CPQ8IYA2 1237 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 TSPYL6Q8N831 410 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 FSIP1Q8NA03 581 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 C8orf58Q8NAV2 365 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 MLKLQ8NB16 471 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 MTMR14Q8NCE2 650 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 C1orf131Q8NDD1 294 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 SMARCC2Q8TAQ2 1214 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CCDC12Q8WUD4 166 aaPredicted RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 PTCD2Q8WV60 388 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 WASF1Q92558 559 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 GLMNQ92990 594 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 PBXIP1Q96AQ6 731 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CALR3Q96L12 384 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 NAPGQ99747 312 aaPredicted RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 EPAS1Q99814 870 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 PAGR1Q9BTK6 254 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CARD6Q9BX69 1037 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 TSGA10Q9BZW7 698 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 TMX1Q9H3N1 280 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CXorf56Q9H5V9 222 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 CEP131Q9UPN4 1083 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 PPP2R2CQ9Y2T4 447 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 RBM8AQ9Y5S9 174 aaKnown RBP3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 USP16Q9Y5T5 823 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 AGLP35573 1532 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 SH3TC1Q8TE82 1336 aa3.93□□□□□ -1.78
AC006539.3-201ENST00000454258 PARP4Q9UKK3 1724 aaKnown RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 COL15A1P39059 1388 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 SLIT3O75094 1523 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 PIK3C2AO00443 1686 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 GOLGA6CA6NDK9 693 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 GOLGA6L10A6NI86 522 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 TMEM88BA6NKF7 163 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 FAM177BA6PVY3 158 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 AP5Z1O43299 807 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 CUTAO60888 179 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 PPP6R2O75170 966 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 WDHD1O75717 1129 aaPredicted RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 DDX58O95786 925 aaKnown RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 GOLGA6DP0CG33 693 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 CMA1P23946 247 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 ERCC5P28715 1186 aaPredicted RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 PPP1R2P41236 205 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 MRPL12P52815 198 aaKnown RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 FANCCQ00597 558 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 CASP8Q14790 479 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 PDCD2Q16342 344 aaPredicted RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 ME3Q16798 604 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 IMMTQ16891 758 aaKnown RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 TSR1Q2NL82 804 aaKnown RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 FOXD4L6Q3SYB3 417 aaPredicted RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 BEND6Q5SZJ8 279 aaPredicted RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 LRCH2Q5VUJ6 765 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 USPL1Q5W0Q7 1092 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 ALS2CLQ60I27 953 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 PRPF40BQ6NWY9 871 aaKnown RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 EMBQ6PCB8 327 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 SLC4A10Q6U841 1118 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 FOXD4L3Q6VB84 417 aaPredicted RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 ZNF662Q6ZS27 426 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 CROCCP2Q86T23 111 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 TMTC1Q8IUR5 882 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 DHX37Q8IY37 1157 aaKnown RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 TEX11Q8IYF3 940 aa3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 C16orf71Q8IYS4 520 aaPredicted RBP3.92□□□□□ -1.78
AC006539.3-201ENST00000454258 CNPY4Q8N129 248 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms