RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 GSTO1P78417 241 aa20.19■□□□□ 0.82
NCKIPSD-208ENST00000454134 FAM43AQ8N2R8 423 aa20.19■□□□□ 0.82
NCKIPSD-208ENST00000454134 EAF2Q96CJ1 260 aaPredicted RBP20.19■□□□□ 0.82
NCKIPSD-208ENST00000454134 ATRNL1Q5VV63 1379 aa20.19■□□□□ 0.82
NCKIPSD-208ENST00000454134 DDTLA6NHG4 134 aaPredicted RBP20.18■□□□□ 0.82
NCKIPSD-208ENST00000454134 LDHCP07864 332 aa20.18■□□□□ 0.82
NCKIPSD-208ENST00000454134 PPIL2Q13356 520 aa20.18■□□□□ 0.82
NCKIPSD-208ENST00000454134 PKN2Q16513 984 aaKnown RBP20.18■□□□□ 0.82
NCKIPSD-208ENST00000454134 HPS5Q9UPZ3 1129 aa20.18■□□□□ 0.82
NCKIPSD-208ENST00000454134 DOCK2Q92608 1830 aa20.18■□□□□ 0.82
NCKIPSD-208ENST00000454134 CYP2E1P05181 493 aaPredicted RBP20.17■□□□□ 0.82
NCKIPSD-208ENST00000454134 CETPP11597 493 aa20.17■□□□□ 0.82
NCKIPSD-208ENST00000454134 ZAP70P43403 619 aa20.17■□□□□ 0.82
NCKIPSD-208ENST00000454134 SNAPC2Q13487 334 aa20.17■□□□□ 0.82
NCKIPSD-208ENST00000454134 PPATQ06203 517 aa20.16■□□□□ 0.82
NCKIPSD-208ENST00000454134 TAF1CQ15572 869 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-208ENST00000454134 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-208ENST00000454134 CD99L2Q8TCZ2 262 aa20.16■□□□□ 0.82
NCKIPSD-208ENST00000454134 ZNF512BQ96KM6 892 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-208ENST00000454134 ZBTB40Q9NUA8 1239 aa20.16■□□□□ 0.82
NCKIPSD-208ENST00000454134 DDX19BQ9UMR2 479 aa20.16■□□□□ 0.82
NCKIPSD-208ENST00000454134 PHF20L1A8MW92 1017 aa20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 BTBD19C9JJ37 291 aa20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 SOX10P56693 466 aa20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 NOL9Q5SY16 702 aaKnown RBP20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 NAA16Q6N069 864 aaPredicted RBP20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 FBXO46Q6PJ61 603 aaPredicted RBP20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 ERC1Q8IUD2 1116 aa20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 IL1RAPL2Q9NP60 686 aa20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 PIH1D3Q9NQM4 214 aaKnown RBP20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 TRIM17Q9Y577 477 aa20.15■□□□□ 0.82
NCKIPSD-208ENST00000454134 MYO5AQ9Y4I1 1855 aaKnown RBP20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 APBB1O00213 710 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 CAP1Q01518 475 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 C20orf194Q5TEA3 1177 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 OTOP1Q7RTM1 612 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 AACSQ86V21 672 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 SIRT2Q8IXJ6 389 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 TEX11Q8IYF3 940 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 ZFYVE28Q9HCC9 887 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 NDUFB9Q9Y6M9 179 aa20.14■□□□□ 0.81
NCKIPSD-208ENST00000454134 FAM196BA6NMK8 535 aa20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 RGS19P49795 217 aa20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 SP3Q02447 781 aa20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 ADGRA1Q86SQ6 560 aa20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 ERO1AQ96HE7 468 aa20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 NOL10Q9BSC4 688 aaKnown RBP20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 BCL11AQ9H165 835 aa20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 AATFQ9NY61 560 aaKnown RBP eCLIP20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 MAST2Q6P0Q8 1798 aa20.13■□□□□ 0.81
NCKIPSD-208ENST00000454134 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
NCKIPSD-208ENST00000454134 MAP3K10Q02779 954 aa20.12■□□□□ 0.81
NCKIPSD-208ENST00000454134 RPAP2Q8IXW5 612 aaPredicted RBP20.12■□□□□ 0.81
NCKIPSD-208ENST00000454134 SCYL3Q8IZE3 742 aa20.12■□□□□ 0.81
NCKIPSD-208ENST00000454134 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
NCKIPSD-208ENST00000454134 PICK1Q9NRD5 415 aa20.12■□□□□ 0.81
NCKIPSD-208ENST00000454134 KCNH4Q9UQ05 1017 aa20.12■□□□□ 0.81
NCKIPSD-208ENST00000454134 MAP4K4O95819 1239 aaPredicted RBP20.11■□□□□ 0.81
NCKIPSD-208ENST00000454134 MLLT1Q03111 559 aaPredicted RBP20.11■□□□□ 0.81
NCKIPSD-208ENST00000454134 HSP90AB4PQ58FF6 505 aa20.11■□□□□ 0.81
NCKIPSD-208ENST00000454134 OSBPL5Q9H0X9 879 aaPredicted RBP20.11■□□□□ 0.81
NCKIPSD-208ENST00000454134 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.11■□□□□ 0.81
NCKIPSD-208ENST00000454134 HMMRO75330 724 aa20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 IDH1O75874 414 aaKnown RBP20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 BAG3O95817 575 aa20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 PTPRAP18433 802 aa20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 MOGSQ13724 837 aa20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 ANTXR1Q9H6X2 564 aa20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 ZCCHC17Q9NP64 241 aaKnown RBP20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 ZHX2Q9Y6X8 837 aa20.1■□□□□ 0.81
NCKIPSD-208ENST00000454134 CYP7A1P22680 504 aa20.09■□□□□ 0.81
NCKIPSD-208ENST00000454134 CCDC84Q86UT8 332 aaPredicted RBP20.09■□□□□ 0.81
NCKIPSD-208ENST00000454134 EFCC1Q9HA90 598 aa20.09■□□□□ 0.81
NCKIPSD-208ENST00000454134 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.09■□□□□ 0.81
NCKIPSD-208ENST00000454134 PDHXO00330 501 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 TLR2O60603 784 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 CTNND1O60716 968 aaKnown RBP20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 PPP4CP60510 307 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 DYNLL1P63167 89 aaKnown RBP20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 PDE3AQ14432 1141 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 ANKRD23Q86SG2 305 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 MAPKAPK5Q8IW41 473 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 KIF1BPQ96EK5 621 aa20.08■□□□□ 0.81
NCKIPSD-208ENST00000454134 DOCK1Q14185 1865 aa20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 COL2A1P02458 1487 aaPredicted RBP20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 CXCL11O14625 94 aa20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 TBC1D12O60347 775 aa20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 ECM2O94769 699 aaPredicted RBP20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 PLCG2P16885 1265 aa20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 CLASRPQ8N2M8 674 aaKnown RBP20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 CHMP4BQ9H444 224 aaKnown RBP20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 PTPN22Q9Y2R2 807 aa20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 AFG3L2Q9Y4W6 797 aa20.07■□□□□ 0.8
NCKIPSD-208ENST00000454134 GPAT2Q6NUI2 795 aa20.06■□□□□ 0.8
NCKIPSD-208ENST00000454134 MAGEB6Q8N7X4 407 aa20.06■□□□□ 0.8
NCKIPSD-208ENST00000454134 MIGA1Q8NAN2 632 aa20.06■□□□□ 0.8
NCKIPSD-208ENST00000454134 CPA4Q9UI42 421 aa20.06■□□□□ 0.8
NCKIPSD-208ENST00000454134 FLT1P17948 1338 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms