RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MAP4K4O95819 1239 aaPredicted RBP17.82■□□□□ 0.44
HSPG2-207ENST00000453796 RRP1P56182 461 aaKnown RBP17.82■□□□□ 0.44
HSPG2-207ENST00000453796 MAP3K10Q02779 954 aa17.82■□□□□ 0.44
HSPG2-207ENST00000453796 IFNL1Q8IU54 200 aa17.82■□□□□ 0.44
HSPG2-207ENST00000453796 CLASRPQ8N2M8 674 aaKnown RBP17.82■□□□□ 0.44
HSPG2-207ENST00000453796 ZKSCAN4Q969J2 545 aaPredicted RBP17.82■□□□□ 0.44
HSPG2-207ENST00000453796 YTHDC1Q96MU7 727 aaKnown RBP17.82■□□□□ 0.44
HSPG2-207ENST00000453796 CSADQ9Y600 493 aa17.82■□□□□ 0.44
HSPG2-207ENST00000453796 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
HSPG2-207ENST00000453796 DDTLA6NHG4 134 aaPredicted RBP17.81■□□□□ 0.44
HSPG2-207ENST00000453796 SPDYE5A6NIY4 337 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 APBB1O00213 710 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 IGF2BP3O00425 579 aaKnown RBP eCLIP17.81■□□□□ 0.44
HSPG2-207ENST00000453796 TBC1D8O95759 1140 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 INPP5BP32019 993 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 NAA16Q6N069 864 aaPredicted RBP17.81■□□□□ 0.44
HSPG2-207ENST00000453796 ADGRA1Q86SQ6 560 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 NDUFB9Q9Y6M9 179 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 DOCK1Q14185 1865 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 PHIPQ8WWQ0 1821 aa17.81■□□□□ 0.44
HSPG2-207ENST00000453796 PPP4CP60510 307 aa17.8■□□□□ 0.44
HSPG2-207ENST00000453796 PICALMQ13492 652 aa17.8■□□□□ 0.44
HSPG2-207ENST00000453796 NOM1Q5C9Z4 860 aaKnown RBP17.8■□□□□ 0.44
HSPG2-207ENST00000453796 PTPN18Q99952 460 aa17.8■□□□□ 0.44
HSPG2-207ENST00000453796 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
HSPG2-207ENST00000453796 ANTXR1Q9H6X2 564 aa17.8■□□□□ 0.44
HSPG2-207ENST00000453796 PTPRFP10586 1907 aa17.8■□□□□ 0.44
HSPG2-207ENST00000453796 ATAD5Q96QE3 1844 aa17.79■□□□□ 0.44
HSPG2-207ENST00000453796 PHF20L1A8MW92 1017 aa17.79■□□□□ 0.44
HSPG2-207ENST00000453796 ALDH1A1P00352 501 aa17.79■□□□□ 0.44
HSPG2-207ENST00000453796 NOL9Q5SY16 702 aaKnown RBP17.79■□□□□ 0.44
HSPG2-207ENST00000453796 ERO1BQ86YB8 467 aa17.79■□□□□ 0.44
HSPG2-207ENST00000453796 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.79■□□□□ 0.44
HSPG2-207ENST00000453796 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
HSPG2-207ENST00000453796 MYH1P12882 1939 aa17.78■□□□□ 0.44
HSPG2-207ENST00000453796 MYH7P12883 1935 aa17.78■□□□□ 0.44
HSPG2-207ENST00000453796 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
HSPG2-207ENST00000453796 SH3RF3Q8TEJ3 882 aaPredicted RBP17.78■□□□□ 0.44
HSPG2-207ENST00000453796 BRI3BPQ8WY22 251 aa17.78■□□□□ 0.44
HSPG2-207ENST00000453796 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
HSPG2-207ENST00000453796 AATFQ9NY61 560 aaKnown RBP eCLIP17.78■□□□□ 0.44
HSPG2-207ENST00000453796 GPR25O00155 361 aa17.77■□□□□ 0.44
HSPG2-207ENST00000453796 IFIT2P09913 472 aaKnown RBP17.77■□□□□ 0.44
HSPG2-207ENST00000453796 GTF2A2P52657 109 aa17.77■□□□□ 0.44
HSPG2-207ENST00000453796 PPIL2Q13356 520 aa17.77■□□□□ 0.44
HSPG2-207ENST00000453796 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
HSPG2-207ENST00000453796 TEX11Q8IYF3 940 aa17.77■□□□□ 0.44
HSPG2-207ENST00000453796 IRF6O14896 467 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 IDH1O75874 414 aaKnown RBP17.76■□□□□ 0.43
HSPG2-207ENST00000453796 BAG3O95817 575 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 PPATQ06203 517 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 ZNF296Q8WUU4 475 aaPredicted RBP17.76■□□□□ 0.43
HSPG2-207ENST00000453796 ABHD8Q96I13 439 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 NOL10Q9BSC4 688 aaKnown RBP17.76■□□□□ 0.43
HSPG2-207ENST00000453796 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 MCOLN1Q9GZU1 580 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 DCTPP1Q9H773 170 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 PCDHB15Q9Y5E8 787 aa17.76■□□□□ 0.43
HSPG2-207ENST00000453796 DDX60LQ5H9U9 1706 aaKnown RBP17.75■□□□□ 0.43
HSPG2-207ENST00000453796 CCL15-CCL14A0A0B4J2E2 113 aa17.75■□□□□ 0.43
HSPG2-207ENST00000453796 TBC1D12O60347 775 aa17.75■□□□□ 0.43
HSPG2-207ENST00000453796 PLCG2P16885 1265 aa17.75■□□□□ 0.43
HSPG2-207ENST00000453796 CYP7A1P22680 504 aa17.75■□□□□ 0.43
HSPG2-207ENST00000453796 CCL15Q16663 113 aa17.75■□□□□ 0.43
HSPG2-207ENST00000453796 TMED8Q6PL24 325 aaPredicted RBP17.75■□□□□ 0.43
HSPG2-207ENST00000453796 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
HSPG2-207ENST00000453796 DYNLL1P63167 89 aaKnown RBP17.74■□□□□ 0.43
HSPG2-207ENST00000453796 MAP3K12Q12852 859 aa17.74■□□□□ 0.43
HSPG2-207ENST00000453796 DGKZQ13574 1117 aa17.74■□□□□ 0.43
HSPG2-207ENST00000453796 OTUD7BQ6GQQ9 843 aa17.74■□□□□ 0.43
HSPG2-207ENST00000453796 MAGEB6Q8N7X4 407 aa17.74■□□□□ 0.43
HSPG2-207ENST00000453796 KCNH4Q9UQ05 1017 aa17.74■□□□□ 0.43
HSPG2-207ENST00000453796 FLT1P17948 1338 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 ATP5JP18859 108 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 CRHR2Q13324 411 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 SNAPC2Q13487 334 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 TTF1Q15361 905 aaPredicted RBP17.73■□□□□ 0.43
HSPG2-207ENST00000453796 SCYL3Q8IZE3 742 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 TGFBRAP1Q8WUH2 860 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 CRBNQ96SW2 442 aa17.73■□□□□ 0.43
HSPG2-207ENST00000453796 NAV1Q8NEY1 1877 aa17.72■□□□□ 0.43
HSPG2-207ENST00000453796 FKTNO75072 461 aa17.72■□□□□ 0.43
HSPG2-207ENST00000453796 CAPN15O75808 1086 aa17.72■□□□□ 0.43
HSPG2-207ENST00000453796 CETPP11597 493 aa17.72■□□□□ 0.43
HSPG2-207ENST00000453796 CTU1Q7Z7A3 348 aaKnown RBP17.72■□□□□ 0.43
HSPG2-207ENST00000453796 EDC3Q96F86 508 aaKnown RBP17.72■□□□□ 0.43
HSPG2-207ENST00000453796 FAM196BA6NMK8 535 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 BTBD19C9JJ37 291 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 GOLIM4O00461 696 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 CTNND1O60716 968 aaKnown RBP17.71■□□□□ 0.43
HSPG2-207ENST00000453796 PTPRAP18433 802 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 MOGSQ13724 837 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 METTL16Q86W50 562 aaKnown RBP17.71■□□□□ 0.43
HSPG2-207ENST00000453796 CERS3Q8IU89 383 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 MAPKAPK5Q8IW41 473 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 MIGA1Q8NAN2 632 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 DNAJC2Q99543 621 aaKnown RBP17.71■□□□□ 0.43
HSPG2-207ENST00000453796 HAUS7Q99871 368 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms