RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 NAP1L1P55209 391 aaKnown RBP9.48□□□□□ -0.89
SMCO1-202ENST00000452776 SF3A1Q15459 793 aaKnown RBP9.48□□□□□ -0.89
SMCO1-202ENST00000452776 DPCR1Q3MIW9 517 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 ZNF569Q5MCW4 686 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 CDCA2Q69YH5 1023 aaPredicted RBP9.48□□□□□ -0.89
SMCO1-202ENST00000452776 RASGRP2Q7LDG7 609 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 PI4K2BQ8TCG2 481 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 BRF1Q92994 677 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 EVI5LQ96CN4 794 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 SPDL1Q96EA4 605 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 RUFY1Q96T51 708 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 LARP6Q9BRS8 491 aaKnown RBP9.48□□□□□ -0.89
SMCO1-202ENST00000452776 GOLPH3LQ9H4A5 285 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 CORO1CQ9ULV4 474 aaPredicted RBP9.48□□□□□ -0.89
SMCO1-202ENST00000452776 LUC7L3O95232 432 aaKnown RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 MAP4K4O95819 1239 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 PDIA5Q14554 519 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 RNF187Q5TA31 235 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 CAPRIN2Q6IMN6 1127 aaKnown RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 CCNI2Q6ZMN8 369 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 PPFIBP1Q86W92 1011 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 PDILTQ8N807 584 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 TRIM58Q8NG06 486 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 SSH3Q8TE77 659 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 DTNBP1Q96EV8 351 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 BORCS6Q96GS4 357 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 SPAG5Q96R06 1193 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 ZSWIM4Q9H7M6 989 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 TUBE1Q9UJT0 475 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 FAM184BQ9ULE4 1060 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 ADGRB1O14514 1584 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 KDM6AO15550 1401 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 CDKL5O76039 1030 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 RTN3O95197 1032 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-202ENST00000452776 FERP16591 822 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 CMA1P23946 247 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 ADCK5Q3MIX3 580 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 CYB5D1Q6P9G0 228 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 TTLL7Q6ZT98 887 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 ANKRD23Q86SG2 305 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 CCDC13Q8IYE1 715 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 ARFGAP2Q8N6H7 521 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 TEX9Q8N6V9 391 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 TC2NQ8N9U0 490 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 OR8K1Q8NGG5 319 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 LMBR1Q8WVP7 490 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 CENPHQ9H3R5 247 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 C19orf44Q9H6X5 657 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 KIF9Q9HAQ2 790 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 ZRANB1Q9UGI0 708 aa9.47□□□□□ -0.89
SMCO1-202ENST00000452776 LRRC7Q96NW7 1537 aa9.46□□□□□ -0.89
SMCO1-202ENST00000452776 HSF2BPO75031 334 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 ZNF202O95125 648 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 GHRP10912 638 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 G3BP1Q13283 466 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMCO1-202ENST00000452776 NNTQ13423 1086 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 RIPK1Q13546 671 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 SKIDA1Q1XH10 827 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 KIAA0753Q2KHM9 967 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 LACTB2Q53H82 288 aaPredicted RBP9.46□□□□□ -0.9
SMCO1-202ENST00000452776 TSHZ3Q63HK5 1081 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 PPP4R3AQ6IN85 833 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 TOGARAM2Q6ZUX3 1019 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 TMTC1Q8IUR5 882 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 EHBP1Q8NDI1 1231 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 FMNL2Q96PY5 1086 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 GGNBP2Q9H3C7 697 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 SUGCTQ9HAC7 445 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 PCDHA7Q9UN72 937 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 IQSEC3Q9UPP2 1182 aaPredicted RBP9.46□□□□□ -0.9
SMCO1-202ENST00000452776 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 RBM8AQ9Y5S9 174 aaKnown RBP9.46□□□□□ -0.9
SMCO1-202ENST00000452776 GRIN2DO15399 1336 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 ZCCHC11Q5TAX3 1644 aaKnown RBP9.46□□□□□ -0.9
SMCO1-202ENST00000452776 TET3O43151 1660 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 QRICH2Q9H0J4 1663 aa9.46□□□□□ -0.9
SMCO1-202ENST00000452776 SLC27A2O14975 620 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 GALR2O43603 387 aaPredicted RBP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 IMPDH2P12268 514 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 CPA1P15085 419 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 AKAP17AQ02040 695 aaKnown RBP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 MTX1Q13505 466 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 CCDC57Q2TAC2 916 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 SLC30A9Q6PML9 568 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 KDM7AQ6ZMT4 941 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 FUKQ8N0W3 1084 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 ZFAND2BQ8WV99 257 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 IL25Q9H293 177 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 EBF2Q9HAK2 575 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.45□□□□□ -0.9
SMCO1-202ENST00000452776 ABCC3O15438 1527 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 SYCP2Q9BX26 1530 aa9.45□□□□□ -0.9
SMCO1-202ENST00000452776 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms