RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 GPR75-ASB3A0A0A6YYF3 556 aa15.83■□□□□ 0.12
CHD3-206ENST00000452447 SP3Q02447 781 aa15.83■□□□□ 0.12
CHD3-206ENST00000452447 NSUN4Q96CB9 384 aaKnown RBP15.83■□□□□ 0.12
CHD3-206ENST00000452447 DOCK2Q92608 1830 aa15.82■□□□□ 0.12
CHD3-206ENST00000452447 SOX10P56693 466 aa15.82■□□□□ 0.12
CHD3-206ENST00000452447 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
CHD3-206ENST00000452447 DBNDD2Q9BQY9 259 aa15.82■□□□□ 0.12
CHD3-206ENST00000452447 CEP85Q6P2H3 762 aa15.81■□□□□ 0.12
CHD3-206ENST00000452447 OTOP1Q7RTM1 612 aa15.81■□□□□ 0.12
CHD3-206ENST00000452447 CD99L2Q8TCZ2 262 aa15.81■□□□□ 0.12
CHD3-206ENST00000452447 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
CHD3-206ENST00000452447 NOL10Q9BSC4 688 aaKnown RBP15.81■□□□□ 0.12
CHD3-206ENST00000452447 SNRKQ9NRH2 765 aa15.81■□□□□ 0.12
CHD3-206ENST00000452447 HTTP42858 3142 aa15.8■□□□□ 0.12
CHD3-206ENST00000452447 MAP4K4O95819 1239 aaPredicted RBP15.8■□□□□ 0.12
CHD3-206ENST00000452447 NOL9Q5SY16 702 aaKnown RBP15.8■□□□□ 0.12
CHD3-206ENST00000452447 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.8■□□□□ 0.12
CHD3-206ENST00000452447 ZCCHC17Q9NP64 241 aaKnown RBP15.8■□□□□ 0.12
CHD3-206ENST00000452447 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
CHD3-206ENST00000452447 KIAA0100Q14667 2235 aaKnown RBP15.8■□□□□ 0.12
CHD3-206ENST00000452447 DDTLA6NHG4 134 aaPredicted RBP15.79■□□□□ 0.12
CHD3-206ENST00000452447 BTBD19C9JJ37 291 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 RHBDL3P58872 404 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 ARHGEF6Q15052 776 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 ERC1Q8IUD2 1116 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 ZNF512BQ96KM6 892 aaPredicted RBP15.79■□□□□ 0.12
CHD3-206ENST00000452447 EFCC1Q9HA90 598 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 PICK1Q9NRD5 415 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 RFX7Q2KHR2 1363 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 ATRNL1Q5VV63 1379 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
CHD3-206ENST00000452447 NAA16Q6N069 864 aaPredicted RBP15.79■□□□□ 0.12
CHD3-206ENST00000452447 SH3BP5LQ7L8J4 393 aa15.79■□□□□ 0.12
CHD3-206ENST00000452447 CCDC8Q9H0W5 538 aaPredicted RBP15.79■□□□□ 0.12
CHD3-206ENST00000452447 DBNLQ9UJU6 430 aaKnown RBP15.79■□□□□ 0.12
CHD3-206ENST00000452447 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
CHD3-206ENST00000452447 TLR2O60603 784 aa15.78■□□□□ 0.12
CHD3-206ENST00000452447 BAG3O95817 575 aa15.78■□□□□ 0.12
CHD3-206ENST00000452447 EAF2Q96CJ1 260 aaPredicted RBP15.78■□□□□ 0.12
CHD3-206ENST00000452447 RCAN3Q9UKA8 241 aa15.78■□□□□ 0.12
CHD3-206ENST00000452447 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
CHD3-206ENST00000452447 KCNH4Q9UQ05 1017 aa15.78■□□□□ 0.12
CHD3-206ENST00000452447 EXOC6BQ9Y2D4 811 aa15.78■□□□□ 0.12
CHD3-206ENST00000452447 MYO5AQ9Y4I1 1855 aaKnown RBP15.78■□□□□ 0.12
CHD3-206ENST00000452447 CYP2E1P05181 493 aaPredicted RBP15.77■□□□□ 0.11
CHD3-206ENST00000452447 MAP3K10Q02779 954 aa15.77■□□□□ 0.11
CHD3-206ENST00000452447 HSP90AB4PQ58FF6 505 aa15.77■□□□□ 0.11
CHD3-206ENST00000452447 TEX11Q8IYF3 940 aa15.77■□□□□ 0.11
CHD3-206ENST00000452447 SCYL3Q8IZE3 742 aa15.77■□□□□ 0.11
CHD3-206ENST00000452447 CHMP4BQ9H444 224 aaKnown RBP15.77■□□□□ 0.11
CHD3-206ENST00000452447 PTPN22Q9Y2R2 807 aa15.77■□□□□ 0.11
CHD3-206ENST00000452447 COG6Q9Y2V7 657 aa15.77■□□□□ 0.11
CHD3-206ENST00000452447 ZHX2Q9Y6X8 837 aa15.77■□□□□ 0.11
CHD3-206ENST00000452447 CXCL11O14625 94 aa15.76■□□□□ 0.11
CHD3-206ENST00000452447 CTNND1O60716 968 aaKnown RBP15.76■□□□□ 0.11
CHD3-206ENST00000452447 PLCG2P16885 1265 aa15.76■□□□□ 0.11
CHD3-206ENST00000452447 ZAP70P43403 619 aa15.76■□□□□ 0.11
CHD3-206ENST00000452447 ANKRD23Q86SG2 305 aa15.76■□□□□ 0.11
CHD3-206ENST00000452447 AATFQ9NY61 560 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHD3-206ENST00000452447 TLR7Q9NYK1 1049 aaKnown RBP15.76■□□□□ 0.11
CHD3-206ENST00000452447 PDHXO00330 501 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 TBC1D12O60347 775 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 IGSF3O75054 1194 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 HMMRO75330 724 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 KIF22Q14807 665 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 AACSQ86V21 672 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 RPAP2Q8IXW5 612 aaPredicted RBP15.75■□□□□ 0.11
CHD3-206ENST00000452447 OSBPL5Q9H0X9 879 aaPredicted RBP15.75■□□□□ 0.11
CHD3-206ENST00000452447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.75■□□□□ 0.11
CHD3-206ENST00000452447 TNRC18O15417 2968 aaPredicted RBP15.75■□□□□ 0.11
CHD3-206ENST00000452447 DOCK1Q14185 1865 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 MAST2Q6P0Q8 1798 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 PTPRAP18433 802 aa15.75■□□□□ 0.11
CHD3-206ENST00000452447 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
CHD3-206ENST00000452447 SLURP2P0DP57 97 aa15.74■□□□□ 0.11
CHD3-206ENST00000452447 FASTKD5Q7L8L6 764 aaKnown RBP15.74■□□□□ 0.11
CHD3-206ENST00000452447 BRCA2P51587 3418 aa15.73■□□□□ 0.11
CHD3-206ENST00000452447 COL2A1P02458 1487 aaPredicted RBP15.73■□□□□ 0.11
CHD3-206ENST00000452447 IDH1O75874 414 aaKnown RBP15.73■□□□□ 0.11
CHD3-206ENST00000452447 PPP4CP60510 307 aa15.73■□□□□ 0.11
CHD3-206ENST00000452447 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
CHD3-206ENST00000452447 IL1RAPL2Q9NP60 686 aa15.73■□□□□ 0.11
CHD3-206ENST00000452447 PIH1D3Q9NQM4 214 aaKnown RBP15.73■□□□□ 0.11
CHD3-206ENST00000452447 ZBTB40Q9NUA8 1239 aa15.73■□□□□ 0.11
CHD3-206ENST00000452447 AFG3L2Q9Y4W6 797 aa15.73■□□□□ 0.11
CHD3-206ENST00000452447 CDK5RAP2Q96SN8 1893 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 A0A0G2JLL6 359 aaPredicted RBP15.72■□□□□ 0.11
CHD3-206ENST00000452447 FAM196BA6NMK8 535 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 APBB1O00213 710 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 LACTBP83111 547 aaPredicted RBP15.72■□□□□ 0.11
CHD3-206ENST00000452447 CAP1Q01518 475 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 MOGSQ13724 837 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 GADL1Q6ZQY3 521 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 PRRT2Q7Z6L0 340 aaPredicted RBP15.72■□□□□ 0.11
CHD3-206ENST00000452447 ADGRA1Q86SQ6 560 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 CLASRPQ8N2M8 674 aaKnown RBP15.72■□□□□ 0.11
CHD3-206ENST00000452447 TGFBRAP1Q8WUH2 860 aa15.72■□□□□ 0.11
CHD3-206ENST00000452447 PARK7Q99497 189 aaKnown RBP15.72■□□□□ 0.11
CHD3-206ENST00000452447 DHX36Q9H2U1 1008 aaKnown RBP15.72■□□□□ 0.11
CHD3-206ENST00000452447 PI4KBQ9UBF8 816 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms