RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TESPA1A2RU30 521 aaPredicted RBP20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 SPDYE5A6NIY4 337 aa20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 FKTNO75072 461 aa20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 OTUD7BQ6GQQ9 843 aa20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 ZSCAN29Q8IWY8 852 aaPredicted RBP20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 BRI3BPQ8WY22 251 aa20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 CCDC136Q96JN2 1154 aa20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 CFHR5Q9BXR6 569 aa20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 IDI2Q9BXS1 227 aa20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 DBNLQ9UJU6 430 aaKnown RBP20.83■□□□□ 0.93
PRPF40A-204ENST00000450303 CCL15-CCL14A0A0B4J2E2 113 aa20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 ENTPD3O75355 529 aa20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 LDHCP07864 332 aa20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 SLURP2P0DP57 97 aa20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 CCL15Q16663 113 aa20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 SH3BP5LQ7L8J4 393 aa20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 ERO1BQ86YB8 467 aa20.82■□□□□ 0.92
PRPF40A-204ENST00000450303 DOCK2Q92608 1830 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 DDTLA6NHG4 134 aaPredicted RBP20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 APBB1O00213 710 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 ZAP70P43403 619 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 GTF2A2P52657 109 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 RHBDL3P58872 404 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 GSTO1P78417 241 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 CRHR2Q13324 411 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 HDAC1Q13547 482 aaPredicted RBP20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 BCL11AQ9H165 835 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 ZNF112Q9UJU3 913 aa20.81■□□□□ 0.92
PRPF40A-204ENST00000450303 IRF6O14896 467 aa20.8■□□□□ 0.92
PRPF40A-204ENST00000450303 CYP2E1P05181 493 aaPredicted RBP20.8■□□□□ 0.92
PRPF40A-204ENST00000450303 NOM1Q5C9Z4 860 aaKnown RBP20.8■□□□□ 0.92
PRPF40A-204ENST00000450303 IL1RAPL2Q9NP60 686 aa20.8■□□□□ 0.92
PRPF40A-204ENST00000450303 RFX7Q2KHR2 1363 aa20.8■□□□□ 0.92
PRPF40A-204ENST00000450303 AACSQ86V21 672 aa20.79■□□□□ 0.92
PRPF40A-204ENST00000450303 SIRT2Q8IXJ6 389 aa20.79■□□□□ 0.92
PRPF40A-204ENST00000450303 FAM43AQ8N2R8 423 aa20.79■□□□□ 0.92
PRPF40A-204ENST00000450303 NDUFB9Q9Y6M9 179 aa20.79■□□□□ 0.92
PRPF40A-204ENST00000450303 PPIL2Q13356 520 aa20.78■□□□□ 0.92
PRPF40A-204ENST00000450303 HSP90AB4PQ58FF6 505 aa20.78■□□□□ 0.92
PRPF40A-204ENST00000450303 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
PRPF40A-204ENST00000450303 ERC1Q8IUD2 1116 aa20.78■□□□□ 0.92
PRPF40A-204ENST00000450303 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
PRPF40A-204ENST00000450303 ATRNL1Q5VV63 1379 aa20.77■□□□□ 0.92
PRPF40A-204ENST00000450303 CETPP11597 493 aa20.77■□□□□ 0.92
PRPF40A-204ENST00000450303 PPATQ06203 517 aa20.77■□□□□ 0.92
PRPF40A-204ENST00000450303 TAF1CQ15572 869 aaPredicted RBP20.77■□□□□ 0.92
PRPF40A-204ENST00000450303 RHPN1Q8TCX5 695 aa20.77■□□□□ 0.92
PRPF40A-204ENST00000450303 SH3RF3Q8TEJ3 882 aaPredicted RBP20.77■□□□□ 0.92
PRPF40A-204ENST00000450303 ZNF512BQ96KM6 892 aaPredicted RBP20.77■□□□□ 0.92
PRPF40A-204ENST00000450303 PHF20L1A8MW92 1017 aa20.76■□□□□ 0.91
PRPF40A-204ENST00000450303 SNAPC2Q13487 334 aa20.76■□□□□ 0.91
PRPF40A-204ENST00000450303 TEX11Q8IYF3 940 aa20.76■□□□□ 0.91
PRPF40A-204ENST00000450303 GCC1Q96CN9 775 aa20.76■□□□□ 0.91
PRPF40A-204ENST00000450303 NOL10Q9BSC4 688 aaKnown RBP20.76■□□□□ 0.91
PRPF40A-204ENST00000450303 AATFQ9NY61 560 aaKnown RBP eCLIP20.76■□□□□ 0.91
PRPF40A-204ENST00000450303 FAM196BA6NMK8 535 aa20.75■□□□□ 0.91
PRPF40A-204ENST00000450303 BTBD19C9JJ37 291 aa20.75■□□□□ 0.91
PRPF40A-204ENST00000450303 NOL9Q5SY16 702 aaKnown RBP20.75■□□□□ 0.91
PRPF40A-204ENST00000450303 ADGRA1Q86SQ6 560 aa20.75■□□□□ 0.91
PRPF40A-204ENST00000450303 CD99L2Q8TCZ2 262 aa20.75■□□□□ 0.91
PRPF40A-204ENST00000450303 HPS5Q9UPZ3 1129 aa20.75■□□□□ 0.91
PRPF40A-204ENST00000450303 MAST2Q6P0Q8 1798 aa20.74■□□□□ 0.91
PRPF40A-204ENST00000450303 PKN2Q16513 984 aaKnown RBP20.74■□□□□ 0.91
PRPF40A-204ENST00000450303 DCTPP1Q9H773 170 aa20.74■□□□□ 0.91
PRPF40A-204ENST00000450303 ZFYVE28Q9HCC9 887 aa20.74■□□□□ 0.91
PRPF40A-204ENST00000450303 ZBTB47Q9UFB7 747 aaPredicted RBP20.74■□□□□ 0.91
PRPF40A-204ENST00000450303 TRIM17Q9Y577 477 aa20.74■□□□□ 0.91
PRPF40A-204ENST00000450303 RAB11FIP3O75154 756 aa20.73■□□□□ 0.91
PRPF40A-204ENST00000450303 IGHDP01880 384 aa20.73■□□□□ 0.91
PRPF40A-204ENST00000450303 MAP3K10Q02779 954 aa20.73■□□□□ 0.91
PRPF40A-204ENST00000450303 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
PRPF40A-204ENST00000450303 CENPQQ7L2Z9 268 aaPredicted RBP20.73■□□□□ 0.91
PRPF40A-204ENST00000450303 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
PRPF40A-204ENST00000450303 ANTXR1Q9H6X2 564 aa20.73■□□□□ 0.91
PRPF40A-204ENST00000450303 NPM3O75607 178 aaKnown RBP20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 IDH1O75874 414 aaKnown RBP20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 BAG3O95817 575 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 MAP4K4O95819 1239 aaPredicted RBP20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 CYP7A1P22680 504 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 SOX10P56693 466 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 DYNLL1P63167 89 aaKnown RBP20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 SP3Q02447 781 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 FBXO46Q6PJ61 603 aaPredicted RBP20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 SCYL3Q8IZE3 742 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 KIF1BPQ96EK5 621 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 ERO1AQ96HE7 468 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 CDK5RAP2Q96SN8 1893 aa20.72■□□□□ 0.91
PRPF40A-204ENST00000450303 CAP1Q01518 475 aa20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 OTOP1Q7RTM1 612 aa20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 CCDC84Q86UT8 332 aaPredicted RBP20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 MAPKAPK5Q8IW41 473 aa20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 CLASRPQ8N2M8 674 aaKnown RBP20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 TGFBRAP1Q8WUH2 860 aa20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 PICK1Q9NRD5 415 aa20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 KCNH4Q9UQ05 1017 aa20.71■□□□□ 0.91
PRPF40A-204ENST00000450303 ZHX2Q9Y6X8 837 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms