RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ZNF112Q9UJU3 913 aa26.93■■□□□ 1.9
CPSF7-208ENST00000450000 OTOFQ9HC10 1997 aa26.92■■□□□ 1.9
CPSF7-208ENST00000450000 GPR75-ASB3A0A0A6YYF3 556 aa26.92■■□□□ 1.9
CPSF7-208ENST00000450000 MAP4K4O95819 1239 aaPredicted RBP26.92■■□□□ 1.9
CPSF7-208ENST00000450000 MCAMP43121 646 aa26.92■■□□□ 1.9
CPSF7-208ENST00000450000 KIF22Q14807 665 aa26.92■■□□□ 1.9
CPSF7-208ENST00000450000 PANK1Q8TE04 598 aa26.92■■□□□ 1.9
CPSF7-208ENST00000450000 ZCCHC17Q9NP64 241 aaKnown RBP26.92■■□□□ 1.9
CPSF7-208ENST00000450000 SNRKQ9NRH2 765 aa26.92■■□□□ 1.9
CPSF7-208ENST00000450000 NSUN4Q96CB9 384 aaKnown RBP26.91■■□□□ 1.9
CPSF7-208ENST00000450000 DBNDD2Q9BQY9 259 aa26.91■■□□□ 1.9
CPSF7-208ENST00000450000 BTBD19C9JJ37 291 aa26.9■■□□□ 1.9
CPSF7-208ENST00000450000 BAG3O95817 575 aa26.9■■□□□ 1.9
CPSF7-208ENST00000450000 NOL9Q5SY16 702 aaKnown RBP26.9■■□□□ 1.9
CPSF7-208ENST00000450000 ERC1Q8IUD2 1116 aa26.9■■□□□ 1.9
CPSF7-208ENST00000450000 AK9Q5TCS8 1911 aa26.89■■□□□ 1.9
CPSF7-208ENST00000450000 NAA16Q6N069 864 aaPredicted RBP26.89■■□□□ 1.9
CPSF7-208ENST00000450000 NOP58Q9Y2X3 529 aaKnown RBP26.89■■□□□ 1.9
CPSF7-208ENST00000450000 TEX11Q8IYF3 940 aa26.88■■□□□ 1.89
CPSF7-208ENST00000450000 SCYL3Q8IZE3 742 aa26.88■■□□□ 1.89
CPSF7-208ENST00000450000 DDTLA6NHG4 134 aaPredicted RBP26.87■■□□□ 1.89
CPSF7-208ENST00000450000 TLR2O60603 784 aa26.87■■□□□ 1.89
CPSF7-208ENST00000450000 HSP90AB4PQ58FF6 505 aa26.87■■□□□ 1.89
CPSF7-208ENST00000450000 CEP85Q6P2H3 762 aa26.87■■□□□ 1.89
CPSF7-208ENST00000450000 CCDC8Q9H0W5 538 aaPredicted RBP26.87■■□□□ 1.89
CPSF7-208ENST00000450000 CHMP4BQ9H444 224 aaKnown RBP26.87■■□□□ 1.89
CPSF7-208ENST00000450000 DDX4Q9NQI0 724 aaKnown RBP26.87■■□□□ 1.89
CPSF7-208ENST00000450000 PTPN22Q9Y2R2 807 aa26.87■■□□□ 1.89
CPSF7-208ENST00000450000 PLCG2P16885 1265 aa26.86■■□□□ 1.89
CPSF7-208ENST00000450000 ANKRD23Q86SG2 305 aa26.86■■□□□ 1.89
CPSF7-208ENST00000450000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.86■■□□□ 1.89
CPSF7-208ENST00000450000 KCNH4Q9UQ05 1017 aa26.86■■□□□ 1.89
CPSF7-208ENST00000450000 ZHX2Q9Y6X8 837 aa26.86■■□□□ 1.89
CPSF7-208ENST00000450000 MYH2Q9UKX2 1941 aa26.86■■□□□ 1.89
CPSF7-208ENST00000450000 PDHXO00330 501 aa26.85■■□□□ 1.89
CPSF7-208ENST00000450000 CXCL11O14625 94 aa26.85■■□□□ 1.89
CPSF7-208ENST00000450000 RHBDL3P58872 404 aa26.85■■□□□ 1.89
CPSF7-208ENST00000450000 SH3BP5LQ7L8J4 393 aa26.85■■□□□ 1.89
CPSF7-208ENST00000450000 CTNND1O60716 968 aaKnown RBP26.84■■□□□ 1.89
CPSF7-208ENST00000450000 NPM3O75607 178 aaKnown RBP26.84■■□□□ 1.89
CPSF7-208ENST00000450000 ZNF512BQ96KM6 892 aaPredicted RBP26.84■■□□□ 1.89
CPSF7-208ENST00000450000 DDX19BQ9UMR2 479 aa26.84■■□□□ 1.89
CPSF7-208ENST00000450000 PHF20L1A8MW92 1017 aa26.83■■□□□ 1.89
CPSF7-208ENST00000450000 HMMRO75330 724 aa26.83■■□□□ 1.89
CPSF7-208ENST00000450000 FASTKD5Q7L8L6 764 aaKnown RBP26.83■■□□□ 1.89
CPSF7-208ENST00000450000 ZNF384Q8TF68 577 aa26.83■■□□□ 1.89
CPSF7-208ENST00000450000 AATFQ9NY61 560 aaKnown RBP eCLIP26.83■■□□□ 1.89
CPSF7-208ENST00000450000 EXOC6BQ9Y2D4 811 aa26.83■■□□□ 1.89
CPSF7-208ENST00000450000 IGSF3O75054 1194 aa26.82■■□□□ 1.88
CPSF7-208ENST00000450000 ZAP70P43403 619 aa26.82■■□□□ 1.88
CPSF7-208ENST00000450000 AACSQ86V21 672 aa26.82■■□□□ 1.88
CPSF7-208ENST00000450000 PARK7Q99497 189 aaKnown RBP26.82■■□□□ 1.88
CPSF7-208ENST00000450000 TRIM34Q9BYJ4 488 aa26.82■■□□□ 1.88
CPSF7-208ENST00000450000 OSBPL5Q9H0X9 879 aaPredicted RBP26.82■■□□□ 1.88
CPSF7-208ENST00000450000 DBNLQ9UJU6 430 aaKnown RBP26.82■■□□□ 1.88
CPSF7-208ENST00000450000 RCAN3Q9UKA8 241 aa26.82■■□□□ 1.88
CPSF7-208ENST00000450000 RFX7Q2KHR2 1363 aa26.82■■□□□ 1.88
CPSF7-208ENST00000450000 LAMB1P07942 1786 aa26.81■■□□□ 1.88
CPSF7-208ENST00000450000 CYP2E1P05181 493 aaPredicted RBP26.81■■□□□ 1.88
CPSF7-208ENST00000450000 PTPRAP18433 802 aa26.81■■□□□ 1.88
CPSF7-208ENST00000450000 GADL1Q6ZQY3 521 aa26.81■■□□□ 1.88
CPSF7-208ENST00000450000 NBPF11Q86T75 865 aa26.81■■□□□ 1.88
CPSF7-208ENST00000450000 SH3RF3Q8TEJ3 882 aaPredicted RBP26.81■■□□□ 1.88
CPSF7-208ENST00000450000 EAF2Q96CJ1 260 aaPredicted RBP26.81■■□□□ 1.88
CPSF7-208ENST00000450000 COG6Q9Y2V7 657 aa26.81■■□□□ 1.88
CPSF7-208ENST00000450000 TBC1D12O60347 775 aa26.8■■□□□ 1.88
CPSF7-208ENST00000450000 IDH1O75874 414 aaKnown RBP26.8■■□□□ 1.88
CPSF7-208ENST00000450000 MAP3K10Q02779 954 aa26.8■■□□□ 1.88
CPSF7-208ENST00000450000 BCL11AQ9H165 835 aa26.8■■□□□ 1.88
CPSF7-208ENST00000450000 CPA4Q9UI42 421 aa26.8■■□□□ 1.88
CPSF7-208ENST00000450000 ATRNL1Q5VV63 1379 aa26.8■■□□□ 1.88
CPSF7-208ENST00000450000 ECM2O94769 699 aaPredicted RBP26.79■■□□□ 1.88
CPSF7-208ENST00000450000 LACTBP83111 547 aaPredicted RBP26.79■■□□□ 1.88
CPSF7-208ENST00000450000 RPAP2Q8IXW5 612 aaPredicted RBP26.79■■□□□ 1.88
CPSF7-208ENST00000450000 DHX36Q9H2U1 1008 aaKnown RBP26.79■■□□□ 1.88
CPSF7-208ENST00000450000 TLR7Q9NYK1 1049 aaKnown RBP26.79■■□□□ 1.88
CPSF7-208ENST00000450000 APBB1O00213 710 aa26.78■■□□□ 1.88
CPSF7-208ENST00000450000 GNRH1P01148 92 aa26.78■■□□□ 1.88
CPSF7-208ENST00000450000 SLC9C1Q4G0N8 1177 aa26.78■■□□□ 1.88
CPSF7-208ENST00000450000 TGFBRAP1Q8WUH2 860 aa26.78■■□□□ 1.88
CPSF7-208ENST00000450000 TMEM106CQ9BVX2 250 aa26.78■■□□□ 1.88
CPSF7-208ENST00000450000 PI4KBQ9UBF8 816 aa26.78■■□□□ 1.88
CPSF7-208ENST00000450000 TRIM75PA6NK02 468 aa26.77■■□□□ 1.88
CPSF7-208ENST00000450000 CYP7A1P22680 504 aa26.77■■□□□ 1.88
CPSF7-208ENST00000450000 HOXD10P28358 340 aa26.77■■□□□ 1.88
CPSF7-208ENST00000450000 CLASRPQ8N2M8 674 aaKnown RBP26.77■■□□□ 1.88
CPSF7-208ENST00000450000 AFG3L2Q9Y4W6 797 aa26.77■■□□□ 1.88
CPSF7-208ENST00000450000 A0A0G2JLL6 359 aaPredicted RBP26.76■■□□□ 1.87
CPSF7-208ENST00000450000 FAM196BA6NMK8 535 aa26.76■■□□□ 1.87
CPSF7-208ENST00000450000 FMNL1O95466 1100 aaPredicted RBP26.76■■□□□ 1.87
CPSF7-208ENST00000450000 SLURP2P0DP57 97 aa26.76■■□□□ 1.87
CPSF7-208ENST00000450000 PPP4CP60510 307 aa26.76■■□□□ 1.87
CPSF7-208ENST00000450000 MAP3K12Q12852 859 aa26.76■■□□□ 1.87
CPSF7-208ENST00000450000 C17orf99Q6UX52 265 aa26.76■■□□□ 1.87
CPSF7-208ENST00000450000 PRRT2Q7Z6L0 340 aaPredicted RBP26.76■■□□□ 1.87
CPSF7-208ENST00000450000 MAPKAPK5Q8IW41 473 aa26.76■■□□□ 1.87
CPSF7-208ENST00000450000 CRACR2BQ8N4Y2 399 aaPredicted RBP26.76■■□□□ 1.87
CPSF7-208ENST00000450000 IL1RAPL2Q9NP60 686 aa26.76■■□□□ 1.87
CPSF7-208ENST00000450000 PIH1D3Q9NQM4 214 aaKnown RBP26.76■■□□□ 1.87
CPSF7-208ENST00000450000 HERC5Q9UII4 1024 aaKnown RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms