RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PLBD2Q8NHP8 589 aa10.3□□□□□ -0.76
LINC01961-201ENST00000449954 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC01961-201ENST00000449954 DIS3LQ8TF46 1054 aaKnown RBP10.3□□□□□ -0.76
LINC01961-201ENST00000449954 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
LINC01961-201ENST00000449954 BDP1A6H8Y1 2624 aa10.3□□□□□ -0.76
LINC01961-201ENST00000449954 NCOR1O75376 2440 aa10.29□□□□□ -0.76
LINC01961-201ENST00000449954 U2AF1L5P0DN76 240 aaPredicted RBP10.29□□□□□ -0.76
LINC01961-201ENST00000449954 FOSL2P15408 326 aa10.29□□□□□ -0.76
LINC01961-201ENST00000449954 PRSS12P56730 875 aa10.29□□□□□ -0.76
LINC01961-201ENST00000449954 U2AF1Q01081 240 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC01961-201ENST00000449954 TRIM28Q13263 835 aaKnown RBP10.29□□□□□ -0.76
LINC01961-201ENST00000449954 IRF5Q13568 498 aa10.29□□□□□ -0.76
LINC01961-201ENST00000449954 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
LINC01961-201ENST00000449954 ANKRD23Q86SG2 305 aa10.29□□□□□ -0.76
LINC01961-201ENST00000449954 ZBTB38Q8NAP3 1195 aaPredicted RBP10.29□□□□□ -0.76
LINC01961-201ENST00000449954 ANKK1Q8NFD2 765 aa10.29□□□□□ -0.76
LINC01961-201ENST00000449954 CDC5LQ99459 802 aaKnown RBP10.29□□□□□ -0.76
LINC01961-201ENST00000449954 CDHR5Q9HBB8 845 aa10.29□□□□□ -0.76
LINC01961-201ENST00000449954 MGAMO43451 1857 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 DDX60LQ5H9U9 1706 aaKnown RBP10.28□□□□□ -0.76
LINC01961-201ENST00000449954 ARAP2Q8WZ64 1704 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 NEFMP07197 916 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 CCT4P50991 539 aaKnown RBP10.28□□□□□ -0.76
LINC01961-201ENST00000449954 GTF2IP78347 998 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 PPIL2Q13356 520 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 CFAP100Q494V2 611 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 ZNF428Q96B54 188 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 C1QTNF1Q9BXJ1 281 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC01961-201ENST00000449954 C11orf49Q9H6J7 331 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 HCN4Q9Y3Q4 1203 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 DLG5Q8TDM6 1919 aa10.28□□□□□ -0.76
LINC01961-201ENST00000449954 ATP5J2-PTCD1G3V325 749 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 IRF6O14896 467 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 ELNP15502 786 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 FLT3LGP49771 235 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 MYLIPQ8WY64 445 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.77
LINC01961-201ENST00000449954 PARK7Q99497 189 aaKnown RBP10.27□□□□□ -0.77
LINC01961-201ENST00000449954 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.77
LINC01961-201ENST00000449954 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 TSPYL4Q9UJ04 414 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 GABRQQ9UN88 632 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 LEMD3Q9Y2U8 911 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 SNCAIPQ9Y6H5 919 aa10.27□□□□□ -0.77
LINC01961-201ENST00000449954 PDHXO00330 501 aa10.26□□□□□ -0.77
LINC01961-201ENST00000449954 PDE8AO60658 829 aa10.26□□□□□ -0.77
LINC01961-201ENST00000449954 HSPA5P11021 654 aaKnown RBP10.26□□□□□ -0.77
LINC01961-201ENST00000449954 BCRP11274 1271 aa10.26□□□□□ -0.77
LINC01961-201ENST00000449954 PRMT6Q96LA8 375 aaPredicted RBP10.26□□□□□ -0.77
LINC01961-201ENST00000449954 TIMELESSQ9UNS1 1208 aa10.26□□□□□ -0.77
LINC01961-201ENST00000449954 MINPP1Q9UNW1 487 aa10.26□□□□□ -0.77
LINC01961-201ENST00000449954 CACNA1AO00555 2505 aa10.26□□□□□ -0.77
LINC01961-201ENST00000449954 SEMA3EO15041 775 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 PER1O15534 1290 aaPredicted RBP10.25□□□□□ -0.77
LINC01961-201ENST00000449954 TNNI2P48788 182 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 FKBP1AP62942 108 aaKnown RBP10.25□□□□□ -0.77
LINC01961-201ENST00000449954 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
LINC01961-201ENST00000449954 PPATQ06203 517 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 TXNRD3Q86VQ6 643 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 CERS5Q8N5B7 392 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
LINC01961-201ENST00000449954 TEPSINQ96N21 525 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 LBHD1Q9BQE6 289 aaPredicted RBP10.25□□□□□ -0.77
LINC01961-201ENST00000449954 BABAM1Q9NWV8 329 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 PCDHAC2Q9Y5I4 1007 aa10.25□□□□□ -0.77
LINC01961-201ENST00000449954 DNAH12Q6ZR08 3092 aa10.24□□□□□ -0.77
LINC01961-201ENST00000449954 SMAPO00193 183 aa10.24□□□□□ -0.77
LINC01961-201ENST00000449954 RBM5P52756 815 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC01961-201ENST00000449954 HOOK2Q96ED9 719 aa10.24□□□□□ -0.77
LINC01961-201ENST00000449954 WRNIP1Q96S55 665 aa10.24□□□□□ -0.77
LINC01961-201ENST00000449954 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
LINC01961-201ENST00000449954 SPEF2Q9C093 1822 aa10.23□□□□□ -0.77
LINC01961-201ENST00000449954 TNPO2O14787 897 aaKnown RBP10.23□□□□□ -0.77
LINC01961-201ENST00000449954 HMGCRP04035 888 aa10.23□□□□□ -0.77
LINC01961-201ENST00000449954 PCCAP05165 728 aaPredicted RBP10.23□□□□□ -0.77
LINC01961-201ENST00000449954 SMAD3P84022 425 aaKnown RBP10.23□□□□□ -0.77
LINC01961-201ENST00000449954 UHRF1Q96T88 793 aaPredicted RBP10.23□□□□□ -0.77
LINC01961-201ENST00000449954 ZNF70Q9UC06 446 aaPredicted RBP10.23□□□□□ -0.77
LINC01961-201ENST00000449954 OGDHLQ9ULD0 1010 aa10.23□□□□□ -0.77
LINC01961-201ENST00000449954 PFASO15067 1338 aa10.23□□□□□ -0.77
LINC01961-201ENST00000449954 F8W031 263 aaPredicted RBP10.22□□□□□ -0.77
LINC01961-201ENST00000449954 CTSWP56202 376 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.22□□□□□ -0.77
LINC01961-201ENST00000449954 ADAMTS19Q8TE59 1207 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 CCDC85AQ96PX6 553 aaPredicted RBP10.22□□□□□ -0.77
LINC01961-201ENST00000449954 TMEM39BQ9GZU3 492 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 ANKRD2Q9GZV1 360 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 TTYH1Q9H313 450 aaPredicted RBP10.22□□□□□ -0.77
LINC01961-201ENST00000449954 CD209Q9NNX6 404 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 HMX1Q9NP08 348 aaPredicted RBP10.22□□□□□ -0.77
LINC01961-201ENST00000449954 NPDC1Q9NQX5 325 aaPredicted RBP10.22□□□□□ -0.77
LINC01961-201ENST00000449954 CHPF2Q9P2E5 772 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 SERPINA10Q9UK55 444 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 PNMA3Q9UL41 463 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 KCNH4Q9UQ05 1017 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 AOX1Q06278 1338 aa10.22□□□□□ -0.77
LINC01961-201ENST00000449954 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.77
LINC01961-201ENST00000449954 KLRK1P26718 216 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 398 ms