RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 RGS3P49796 1198 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 NFIAQ12857 509 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 SLC4A8Q2Y0W8 1093 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 ATF7IPQ6VMQ6 1270 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 MIGA2Q7L4E1 593 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 SCYL3Q8IZE3 742 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 FAM163AQ96GL9 167 aaPredicted RBP8.51□□□□□ -1.05
PBRM1-216ENST00000449505 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 PA2G4Q9UQ80 394 aaKnown RBP8.51□□□□□ -1.05
PBRM1-216ENST00000449505 PTCH2Q9Y6C5 1203 aa8.51□□□□□ -1.05
PBRM1-216ENST00000449505 ATRNL1Q5VV63 1379 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 PDHXO00330 501 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 NPM3O75607 178 aaKnown RBP8.5□□□□□ -1.05
PBRM1-216ENST00000449505 UQCRFS1P1P0C7P4 283 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 BTDP43251 543 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 FCGRTP55899 365 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 G3BP1Q13283 466 aaKnown RBP eCLIP8.5□□□□□ -1.05
PBRM1-216ENST00000449505 FTSJ3Q8IY81 847 aaKnown RBP8.5□□□□□ -1.05
PBRM1-216ENST00000449505 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 RAET1EQ8TD07 263 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 FRAT1Q92837 279 aaPredicted RBP8.5□□□□□ -1.05
PBRM1-216ENST00000449505 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 NEUROD6Q96NK8 337 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 PNMA3Q9UL41 463 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 SLC45A1Q9Y2W3 748 aa8.5□□□□□ -1.05
PBRM1-216ENST00000449505 BRCA2P51587 3418 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 POTEFA5A3E0 1075 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 CTNND1O60716 968 aaKnown RBP8.49□□□□□ -1.05
PBRM1-216ENST00000449505 FMNL1O95466 1100 aaPredicted RBP8.49□□□□□ -1.05
PBRM1-216ENST00000449505 TRIM27P14373 513 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 PLCG2P16885 1265 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 CAPN2P17655 700 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 ADORA1P30542 326 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 PSMC4P43686 418 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 UBXN2AP68543 259 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 TFCP2Q12800 502 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 PABPC4Q13310 644 aaKnown RBP eCLIP8.49□□□□□ -1.05
PBRM1-216ENST00000449505 OS9Q13438 667 aaPredicted RBP8.49□□□□□ -1.05
PBRM1-216ENST00000449505 PICALMQ13492 652 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 ZKSCAN2Q63HK3 967 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 C17orf99Q6UX52 265 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 SPATA5Q8NB90 893 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 SMCR8Q8TEV9 937 aaPredicted RBP8.49□□□□□ -1.05
PBRM1-216ENST00000449505 MYPNQ86TC9 1320 aa8.49□□□□□ -1.05
PBRM1-216ENST00000449505 GPR75-ASB3A0A0A6YYF3 556 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 A0A0G2JLL6 359 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-216ENST00000449505 BAG3O95817 575 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 ARID4AP29374 1257 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-216ENST00000449505 TIMM10P62072 90 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 MECOMQ03112 1051 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 CCDC158Q5M9N0 1113 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 PRRT2Q7Z6L0 340 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-216ENST00000449505 CERS3Q8IU89 383 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 OSBPL5Q9H0X9 879 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-216ENST00000449505 GPR108Q9NPR9 543 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 RAI14Q9P0K7 980 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 LRP2BPQ9P2M1 347 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 SRRDQ9UH36 339 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 CPA4Q9UI42 421 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 HERC5Q9UII4 1024 aaKnown RBP8.48□□□□□ -1.05
PBRM1-216ENST00000449505 ZHX2Q9Y6X8 837 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 MKI67P46013 3256 aaKnown RBP8.48□□□□□ -1.05
PBRM1-216ENST00000449505 ADGRA2Q96PE1 1338 aa8.48□□□□□ -1.05
PBRM1-216ENST00000449505 PTPRFP10586 1907 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 TBC1D12O60347 775 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 PTPRAP18433 802 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 GRK4P32298 578 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 TTC39AQ5SRH9 613 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-216ENST00000449505 GADL1Q6ZQY3 521 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 PROCA1Q8NCQ7 364 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-216ENST00000449505 TRIM34Q9BYJ4 488 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 DHX36Q9H2U1 1008 aaKnown RBP8.47□□□□□ -1.05
PBRM1-216ENST00000449505 AS3MTQ9HBK9 375 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 HMG20BQ9P0W2 317 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
PBRM1-216ENST00000449505 AGTPBP1Q9UPW5 1226 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 LOC285556D6RIA3 1793 aa8.47□□□□□ -1.05
PBRM1-216ENST00000449505 ZSWIM8A7E2V4 1837 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 ATAD5Q96QE3 1844 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 PHF20L1A8MW92 1017 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 TNPO2O14787 897 aaKnown RBP8.46□□□□□ -1.06
PBRM1-216ENST00000449505 BCRP11274 1271 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 EN2P19622 333 aaPredicted RBP8.46□□□□□ -1.06
PBRM1-216ENST00000449505 OSBPP22059 807 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 NAA16Q6N069 864 aaPredicted RBP8.46□□□□□ -1.06
PBRM1-216ENST00000449505 TEX11Q8IYF3 940 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 SH3TC2Q8TF17 1288 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 CLUAP1Q96AJ1 413 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 NSUN4Q96CB9 384 aaKnown RBP8.46□□□□□ -1.06
PBRM1-216ENST00000449505 HTATIP2Q9BUP3 242 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 ARHGAP39Q9C0H5 1083 aa8.46□□□□□ -1.06
PBRM1-216ENST00000449505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.46□□□□□ -1.06
PBRM1-216ENST00000449505 AFG3L2Q9Y4W6 797 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms