RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 OGFOD1Q8N543 542 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 ZMYND15Q9H091 742 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 SAP30BPQ9UHR5 308 aaKnown RBP11.75□□□□□ -0.53
CTC1-202ENST00000449476 NR1I2O75469 434 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 TUBB4BP68371 445 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 PPP2R5BQ15173 497 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 AKNAD1Q5T1N1 836 aa11.75□□□□□ -0.53
CTC1-202ENST00000449476 RHOXF2BP0C7M4 288 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 KRT13P13646 458 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
CTC1-202ENST00000449476 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 ADALQ6DHV7 355 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 MICALCLQ6ZW33 695 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 RHOXF2Q9BQY4 288 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 FAM107BQ9H098 131 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 AATFQ9NY61 560 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTC1-202ENST00000449476 CTNND2Q9UQB3 1225 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 EFCAB6Q5THR3 1501 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 ROBO2Q9HCK4 1378 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 PFKFB2O60825 505 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 EZRP15311 586 aaKnown RBP11.74□□□□□ -0.53
CTC1-202ENST00000449476 CTNNA2P26232 953 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 EVCP57679 992 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 PLCD4Q9BRC7 762 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 USP6P35125 1406 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 CCDC122Q5T0U0 273 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 MYRIPQ8NFW9 859 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 SELENOOQ9BVL4 669 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 IMPACTQ9P2X3 320 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 DBNLQ9UJU6 430 aaKnown RBP11.74□□□□□ -0.53
CTC1-202ENST00000449476 GOLGA6L10A0A0M3HER8 536 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 SV2BQ7L1I2 683 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
CTC1-202ENST00000449476 KIF1BO60333 1816 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 hCG_1642624A0A1W2PR95 340 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 ADD1P35611 737 aaKnown RBP11.73□□□□□ -0.53
CTC1-202ENST00000449476 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 HOOK3Q86VS8 718 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 IGSF3O75054 1194 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 MRPL12P52815 198 aaKnown RBP11.73□□□□□ -0.53
CTC1-202ENST00000449476 PDE4DQ08499 809 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 SMC1AQ14683 1233 aaKnown RBP11.73□□□□□ -0.53
CTC1-202ENST00000449476 HS2ST1Q7LGA3 356 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 ARHGEF25Q86VW2 580 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 BICD1Q96G01 975 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
CTC1-202ENST00000449476 FGAP02671 866 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 IBSPP21815 317 aaPredicted RBP11.73□□□□□ -0.53
CTC1-202ENST00000449476 POSTNQ15063 836 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 ZBTB9Q96C00 473 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 KIAA1468Q9P260 1216 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 HDAC9Q9UKV0 1011 aa11.73□□□□□ -0.53
CTC1-202ENST00000449476 CTSWP56202 376 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 CUL4AQ13619 759 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 TRAF5O00463 557 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 UFL1O94874 794 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 BCORL1Q5H9F3 1711 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 TUBBP07437 444 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 PDE6AP16499 860 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 PPP1R2P41236 205 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 NOC4LQ9BVI4 516 aaKnown RBP11.72□□□□□ -0.53
CTC1-202ENST00000449476 VPS54Q9P1Q0 977 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 PLEKHG1Q9ULL1 1385 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 FSD2A1L4K1 749 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 PHACTR2O75167 634 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 TERF1P54274 439 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 PPP2R3AQ06190 1150 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 USP37Q86T82 979 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 CCDC24Q8N4L8 307 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 STAMQ92783 540 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 XPO4Q9C0E2 1151 aaKnown RBP11.72□□□□□ -0.53
CTC1-202ENST00000449476 GPCPD1Q9NPB8 672 aa11.72□□□□□ -0.53
CTC1-202ENST00000449476 ARHGAP6O43182 974 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 FAM13AO94988 1023 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.538e-8■■■■■ 28.7
CTC1-202ENST00000449476 ZNF654Q8IZM8 581 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 ZBTB38Q8NAP3 1195 aaPredicted RBP11.71□□□□□ -0.53
CTC1-202ENST00000449476 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.53
CTC1-202ENST00000449476 CFAP74Q9C0B2 1584 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 PCCAP05165 728 aaPredicted RBP11.71□□□□□ -0.53
CTC1-202ENST00000449476 PFKFB1P16118 471 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 CSGALNACT2Q8N6G5 542 aa11.71□□□□□ -0.53
CTC1-202ENST00000449476 PAK1Q13153 545 aa11.71□□□□□ -0.54
CTC1-202ENST00000449476 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.54
CTC1-202ENST00000449476 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.54
CTC1-202ENST00000449476 TIGD1Q96MW7 591 aa11.71□□□□□ -0.54
CTC1-202ENST00000449476 CARD6Q9BX69 1037 aa11.71□□□□□ -0.54
CTC1-202ENST00000449476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.546e-7■■□□□ 12.6
CTC1-202ENST00000449476 CDK12Q9NYV4 1490 aaPredicted RBP11.71□□□□□ -0.54
CTC1-202ENST00000449476 NEBLO76041 1014 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms