RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 MYCLP12524 364 aaPredicted RBP11.87□□□□□ -0.51
PRDM15-208ENST00000449395 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 TRIM6Q9C030 488 aaPredicted RBP11.87□□□□□ -0.51
PRDM15-208ENST00000449395 CFAP74Q9C0B2 1584 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 A0A1W2PRG0 241 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 CRKLP46109 303 aaKnown RBP11.87□□□□□ -0.51
PRDM15-208ENST00000449395 TSNARE1Q96NA8 513 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 EIF2AK4Q9P2K8 1649 aaKnown RBP11.87□□□□□ -0.51
PRDM15-208ENST00000449395 SOCS7O14512 581 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 KRT24Q2M2I5 525 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
PRDM15-208ENST00000449395 TICAM2Q86XR7 235 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 UGGT2Q9NYU1 1516 aa11.87□□□□□ -0.51
PRDM15-208ENST00000449395 TTC12Q9H892 705 aaPredicted RBP11.86□□□□□ -0.51
PRDM15-208ENST00000449395 MRVI1Q9Y6F6 885 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 BCAMP50895 628 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 KRT222Q8N1A0 295 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 TCHPQ9BT92 498 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 MCM9Q9NXL9 1143 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
PRDM15-208ENST00000449395 KRT83P78385 493 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 KRT79Q5XKE5 535 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 RGS22Q8NE09 1264 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 BICC1Q9H694 974 aaKnown RBP11.86□□□□□ -0.51
PRDM15-208ENST00000449395 RASAL2Q9UJF2 1139 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 ADAMTS12P58397 1594 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 CHMLP26374 656 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 PRPHP41219 470 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 ARID5AQ03989 594 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 SMC5Q8IY18 1101 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 SMC1BQ8NDV3 1235 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 PPP1R14CQ8TAE6 165 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
PRDM15-208ENST00000449395 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 MCM7P33993 719 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 CEP63Q96MT8 703 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 ABCC1P33527 1531 aa11.86□□□□□ -0.51
PRDM15-208ENST00000449395 SPDYE3A6NKU9 549 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
PRDM15-208ENST00000449395 BICDL2A1A5D9 508 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 KIF5AQ12840 1032 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 BRAPQ7Z569 592 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 ABI1Q8IZP0 508 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 UBXN1Q04323 297 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 MCM6Q14566 821 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
PRDM15-208ENST00000449395 NACA2Q9H009 215 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 ZKSCAN5Q9Y2L8 839 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 EIF4E1BA6NMX2 242 aaKnown RBP11.85□□□□□ -0.51
PRDM15-208ENST00000449395 KRT86O43790 486 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 CHRNA5P30532 468 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 SH3TC1Q8TE82 1336 aa11.85□□□□□ -0.51
PRDM15-208ENST00000449395 STX17P56962 302 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 NSMFQ6X4W1 530 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 IGSF1Q8N6C5 1336 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 TUBB4AP04350 444 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 RXRAP19793 462 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 CLCN1P35523 988 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 LMBR1Q8WVP7 490 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
PRDM15-208ENST00000449395 USP26Q9BXU7 913 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 NR1I2O75469 434 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 RAD50Q92878 1312 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 ZFYVE9O95405 1425 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 FAM13AO94988 1023 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 DTHD1Q6ZMT9 781 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 SYNE4Q8N205 404 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 CCDC42Q96M95 316 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 EYA1Q99502 592 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
PRDM15-208ENST00000449395 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
PRDM15-208ENST00000449395 SLU7O95391 586 aaKnown RBP11.84□□□□□ -0.51
PRDM15-208ENST00000449395 FERP16591 822 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 GOLGA1Q92805 767 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 PUS7Q96PZ0 661 aaKnown RBP11.84□□□□□ -0.51
PRDM15-208ENST00000449395 C6orf163Q5TEZ5 329 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 MTFR1LQ9H019 292 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 IFNKQ9P0W0 207 aa11.84□□□□□ -0.51
PRDM15-208ENST00000449395 GNA11P29992 359 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 ZHX1Q9UKY1 873 aaPredicted RBP11.83□□□□□ -0.52
PRDM15-208ENST00000449395 TMEM110-MUSTN1A8MSY1 372 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 IGFBP4P22692 258 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 TEKT1Q969V4 418 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 PAIP2Q9BPZ3 127 aaKnown RBP11.83□□□□□ -0.52
PRDM15-208ENST00000449395 IMPG2Q9BZV3 1241 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 OPA1O60313 960 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 ATP2C2O75185 946 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 MASTLQ96GX5 879 aa11.83□□□□□ -0.52
PRDM15-208ENST00000449395 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms