RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 IGDCC4Q8TDY8 1250 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 STAG1Q8WVM7 1258 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 SRGNP10124 158 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 GUCY1B3Q02153 619 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 EVX2Q03828 476 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 TMEM87BQ96K49 555 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 CD209Q9NNX6 404 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 PARP3Q9Y6F1 533 aa18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 COL11A2P13942 1736 aaPredicted RBP18.81■□□□□ 0.6
AP000253.1-201ENST00000449339 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 LIG1P18858 919 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 ADD1P35611 737 aaKnown RBP18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 PDLIM2Q96JY6 352 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 LRRC37AA6NMS7 1700 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 TMEM67Q5HYA8 995 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 WDR66Q8TBY9 1149 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 LY9Q9HBG7 655 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 PODXL2Q9NZ53 605 aa18.8■□□□□ 0.6
AP000253.1-201ENST00000449339 LTBP1Q14766 1721 aa18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 LDHBP07195 334 aaKnown RBP18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 DIXDC1Q155Q3 683 aa18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 SPTY2D1Q68D10 685 aaPredicted RBP18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 PGBD1Q96JS3 809 aa18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 MYL10Q9BUA6 226 aa18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 KRT23Q9C075 422 aa18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 ORC3Q9UBD5 711 aaPredicted RBP18.79■□□□□ 0.6
AP000253.1-201ENST00000449339 IFIT3O14879 490 aaKnown RBP18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 METAP2P50579 478 aaKnown RBP eCLIP18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 CEBPZQ03701 1054 aaKnown RBP18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 APOA5Q6Q788 366 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 SP8Q8IXZ3 490 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 C8orf76Q96K31 380 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 CTR9Q6PD62 1173 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 NFXL1Q6ZNB6 911 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 FUCA2Q9BTY2 467 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 DACT1Q9NYF0 836 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 MYH2Q9UKX2 1941 aa18.78■□□□□ 0.6
AP000253.1-201ENST00000449339 ESPNB1AK53 854 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 RIMBP2O15034 1052 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 ZBTB22O15209 634 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 NPR1P16066 1061 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 ATL3Q6DD88 541 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 ILDR1Q86SU0 546 aaPredicted RBP18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 SGMS1Q86VZ5 419 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 MICU3Q86XE3 530 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 CAMKK2Q96RR4 588 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
AP000253.1-201ENST00000449339 USP17L12C9JPN9 530 aa18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 USP17L21D6R901 530 aa18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 IL1R1P14778 569 aa18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 FBXO18Q8NFZ0 1043 aa18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 BICD2Q8TD16 824 aa18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 ZNF396Q96N95 335 aaPredicted RBP18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 USP28Q96RU2 1077 aa18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 CRNKL1Q9BZJ0 848 aaKnown RBP18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 FTOQ9C0B1 505 aaKnown RBP eCLIP18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 DCP1AQ9NPI6 582 aaPredicted RBP18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 ANAPC4Q9UJX5 808 aa18.77■□□□□ 0.59
AP000253.1-201ENST00000449339 PRDM1O75626 825 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 CYP2D6P10635 497 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 LIFRP42702 1097 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 OTUD7BQ6GQQ9 843 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 RNF41Q9H4P4 317 aaPredicted RBP18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 RCOR1Q9UKL0 485 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 KIAA1551Q9HCM1 1747 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 ZBTB43O43298 467 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 CDC27P30260 824 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 PDE6BP35913 854 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 SLC15A2Q16348 729 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 CAMK4Q16566 473 aa18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 DDX19AQ9NUU7 478 aaKnown RBP18.76■□□□□ 0.59
AP000253.1-201ENST00000449339 CDKL5O76039 1030 aa18.75■□□□□ 0.59
AP000253.1-201ENST00000449339 MAP3K11Q16584 847 aa18.75■□□□□ 0.59
AP000253.1-201ENST00000449339 NR1I2O75469 434 aa18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 UVSSAQ2YD98 709 aa18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 TMC4Q7Z404 712 aa18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 SH3RF3Q8TEJ3 882 aaPredicted RBP18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 ZNF622Q969S3 477 aaKnown RBP eCLIP18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 GJB4Q9NTQ9 266 aa18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 DUOX1Q9NRD9 1551 aa18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 CPLX2Q6PUV4 134 aaKnown RBP18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 TNMDQ9H2S6 317 aa18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
AP000253.1-201ENST00000449339 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 CCDC192P0DO97 292 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 MASTLQ96GX5 879 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 FAM217BQ9NTX9 383 aaPredicted RBP18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 LAMB1P07942 1786 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 GOLGA8AA7E2F4 631 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 WTAPQ15007 396 aa18.73■□□□□ 0.59
AP000253.1-201ENST00000449339 SART3Q15020 963 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms