RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TBC1D10BQ4KMP7 808 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-203ENST00000449049 MAPKAPK5Q8IW41 473 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-203ENST00000449049 UTRNP46939 3433 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 NFIAQ12857 509 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 SBK1Q52WX2 424 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 IL17RAQ96F46 866 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 ADARB2Q9NS39 739 aaKnown RBP16.75■□□□□ 0.27
SHMT2-203ENST00000449049 ARPP21Q9UBL0 812 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-203ENST00000449049 PALD1Q9ULE6 856 aa16.75■□□□□ 0.27
SHMT2-203ENST00000449049 CYP21A2P08686 494 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 ANAPC15P60006 121 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 IMMTQ16891 758 aaKnown RBP16.74■□□□□ 0.27
SHMT2-203ENST00000449049 RBM26Q5T8P6 1007 aaKnown RBP16.74■□□□□ 0.27
SHMT2-203ENST00000449049 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 FKBP1CQ5VVH2 108 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 CTR9Q6PD62 1173 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 TMOD2Q9NZR1 351 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 MYH1P12882 1939 aa16.74■□□□□ 0.27
SHMT2-203ENST00000449049 COL2A1P02458 1487 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-203ENST00000449049 CLRN2A0PK11 232 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 CACNB3P54284 484 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 PICALMQ13492 652 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 OSBPL5Q9H0X9 879 aaPredicted RBP16.73■□□□□ 0.27
SHMT2-203ENST00000449049 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 ZNF213O14771 459 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 ENTPD3O75355 529 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 RASEFQ8IZ41 740 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 HACL1Q9UJ83 578 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 SNX14Q9Y5W7 946 aa16.73■□□□□ 0.27
SHMT2-203ENST00000449049 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 USP17L21D6R901 530 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
SHMT2-203ENST00000449049 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
SHMT2-203ENST00000449049 PPARAQ07869 468 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 KIF2CQ99661 725 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
SHMT2-203ENST00000449049 CNTNAP1P78357 1384 aa16.71■□□□□ 0.27
SHMT2-203ENST00000449049 ROBO3Q96MS0 1386 aa16.71■□□□□ 0.27
SHMT2-203ENST00000449049 POTECB2RU33 542 aa16.71■□□□□ 0.27
SHMT2-203ENST00000449049 HAND2P61296 217 aa16.71■□□□□ 0.27
SHMT2-203ENST00000449049 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
SHMT2-203ENST00000449049 ATRNL1Q5VV63 1379 aa16.71■□□□□ 0.27
SHMT2-203ENST00000449049 MINDY4BA8MYZ0 360 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 EPHX2P34913 555 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-203ENST00000449049 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 ZFPM1Q8IX07 1006 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 AMOTL1Q8IY63 956 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 SAP30BPQ9UHR5 308 aaKnown RBP16.7■□□□□ 0.26
SHMT2-203ENST00000449049 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-203ENST00000449049 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 CYP2D7A0A087X1C5 515 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 CYP2D6P10635 497 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 TCP10Q12799 353 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 FAM151AQ8WW52 585 aa16.7■□□□□ 0.26
SHMT2-203ENST00000449049 POLR3DP05423 398 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-203ENST00000449049 KRT32Q14532 448 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 STOX1Q6ZVD7 989 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
SHMT2-203ENST00000449049 TAF1DQ9H5J8 278 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-203ENST00000449049 E7EWF7 191 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 PLCD1P51178 756 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 EVX2Q03828 476 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 CTDSPL2Q05D32 466 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 SH3BP5LQ7L8J4 393 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 STAG1Q8WVM7 1258 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
SHMT2-203ENST00000449049 TNNI2P48788 182 aa16.68■□□□□ 0.26
SHMT2-203ENST00000449049 ADCK5Q3MIX3 580 aa16.68■□□□□ 0.26
SHMT2-203ENST00000449049 ANGEL2Q5VTE6 544 aaKnown RBP16.68■□□□□ 0.26
SHMT2-203ENST00000449049 TTC6Q86TZ1 520 aa16.68■□□□□ 0.26
SHMT2-203ENST00000449049 APOBEC3FQ8IUX4 373 aaKnown RBP16.68■□□□□ 0.26
SHMT2-203ENST00000449049 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-203ENST00000449049 FGRP09769 529 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 GGA3Q9NZ52 723 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 HLA-DOAP06340 250 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 PCP11498 1178 aaKnown RBP16.67■□□□□ 0.26
SHMT2-203ENST00000449049 SLC4A8Q2Y0W8 1093 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 EHD4Q9H223 541 aa16.67■□□□□ 0.26
SHMT2-203ENST00000449049 RNF41Q9H4P4 317 aaPredicted RBP16.67■□□□□ 0.26
SHMT2-203ENST00000449049 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
SHMT2-203ENST00000449049 GABPAQ06546 454 aa16.66■□□□□ 0.26
SHMT2-203ENST00000449049 PNMA8AQ86V59 439 aaPredicted RBP16.66■□□□□ 0.26
SHMT2-203ENST00000449049 ZC3H15Q8WU90 426 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms